RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MIPOL1Q8TD10 442 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 RNF128Q8TEB7 428 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 SMAP2Q8WU79 429 aaPredicted RBP4.11□□□□□ -1.75
CCDC7-208ENST00000537047 FNBP1Q96RU3 617 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 KRT12Q99456 494 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 WWTR1Q9GZV5 400 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 S1PR5Q9H228 398 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 ARRDC1-AS1Q9H2J1 176 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 GPR83Q9NYM4 423 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 RHCGQ9UBD6 479 aa4.11□□□□□ -1.75
CCDC7-208ENST00000537047 A0A1W2PN81 502 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 IGKV3-15P01624 115 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 CLEC3BP05452 202 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 CHRNA7P36544 502 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 PAX9P55771 341 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 SNRPEP62304 92 aaKnown RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 TRA2BP62995 288 aaKnown RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 CX3CL1P78423 397 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 TAF13Q15543 124 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 ASTE1Q2TB18 679 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 PCGF3Q3KNV8 242 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 WLSQ5T9L3 541 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 SLC39A11Q8N1S5 342 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 ARHGAP45Q92619 1136 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 ARHGEF2Q92974 986 aaKnown RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 PRICKLE1Q96MT3 831 aaPredicted RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 UBN1Q9NPG3 1134 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 OSER1Q9NX31 292 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 PDP2Q9P2J9 529 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 ZDHHC2Q9UIJ5 367 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 OSGIN1Q9UJX0 560 aa4.1□□□□□ -1.75
CCDC7-208ENST00000537047 EXO1Q9UQ84 846 aaKnown RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.1□□□□□ -1.75
CCDC7-208ENST00000537047 BCL2L11O43521 198 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 HUNKP57058 714 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 SQLEQ14534 574 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 DLG2Q15700 870 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 TSTQ16762 297 aaKnown RBP4.09□□□□□ -1.75
CCDC7-208ENST00000537047 XKR3Q5GH77 459 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 KIRREL3Q8IZU9 778 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 MARVELD2Q8N4S9 558 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 OR13J1Q8NGT2 312 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 ZNF486Q96H40 463 aaPredicted RBP4.09□□□□□ -1.75
CCDC7-208ENST00000537047 C16orf70Q9BSU1 422 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 PDCL3Q9H2J4 239 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 MTUS1Q9ULD2 1270 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC7-208ENST00000537047 PIAS3Q9Y6X2 628 aa4.09□□□□□ -1.75
CCDC7-208ENST00000537047 GAPDHSO14556 408 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-208ENST00000537047 SCAMP1O15126 338 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 RARGP13631 454 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 LY6DQ14210 128 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 FASTKD3Q14CZ7 662 aaKnown RBP4.08□□□□□ -1.76
CCDC7-208ENST00000537047 MDH1BQ5I0G3 518 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 KIAA0930Q6ICG6 404 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-208ENST00000537047 NCEH1Q6PIU2 408 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 LINGO4Q6UY18 593 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 ADGRA1Q86SQ6 560 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 SCYL3Q8IZE3 742 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 MYRIPQ8NFW9 859 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 VANGL1Q8TAA9 524 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-208ENST00000537047 ERLEC1Q96DZ1 483 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 MTERF3Q96E29 417 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 SMC4Q9NTJ3 1288 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 EHD2Q9NZN4 543 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 PPP2R2CQ9Y2T4 447 aa4.08□□□□□ -1.76
CCDC7-208ENST00000537047 C15orf61A6NNL5 157 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 RTL8CO15255 209 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 ACTN1P12814 892 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 TMEM11P17152 192 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 ITIH1P19827 911 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 CA6P23280 308 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 IKQ13123 557 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-208ENST00000537047 RNF212Q495C1 297 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 PHLDA2Q53GA4 152 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 CPLX4Q7Z7G2 160 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 ADIPOR2Q86V24 386 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 CPXCR1Q8N123 301 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 POM121L12Q8N7R1 296 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 C17orf47Q8NEP4 570 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 CMAHPQ9Y471 501 aa4.07□□□□□ -1.76
CCDC7-208ENST00000537047 A0A1W2PR77 199 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 LIPT2A6NK58 231 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 KLLNB2CW77 178 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 DFFBO76075 338 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 CAMPP49913 170 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 MELKQ14680 651 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 ZRSR2Q15696 482 aaKnown RBP4.06□□□□□ -1.76
CCDC7-208ENST00000537047 JADE1Q6IE81 842 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 TMEM139Q8IV31 216 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 TMTC2Q8N394 836 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 NIPA2Q8N8Q9 360 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-208ENST00000537047 DACH2Q96NX9 599 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 SRSF8Q9BRL6 282 aaKnown RBP4.06□□□□□ -1.76
CCDC7-208ENST00000537047 TAS2R14Q9NYV8 317 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 MTMR6Q9Y217 621 aa4.06□□□□□ -1.76
CCDC7-208ENST00000537047 MPTX1A8MV57 137 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms