RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 EZH1Q92800 747 aaPredicted RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 ZNF707Q96C28 371 aaPredicted RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 SH3GL1Q99961 368 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ZCCHC2Q9C0B9 1178 aaKnown RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 ACTR8Q9H981 624 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 COPS7BQ9H9Q2 264 aaPredicted RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 PCDH12Q9NPG4 1184 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 PDE10AQ9Y233 779 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 TMED5Q9Y3A6 229 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CEP350Q5VT06 3117 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 NME4O00746 187 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 SLCO2B1O94956 709 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CYP17A1P05093 508 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CISD3P0C7P0 127 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ARSAP15289 507 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CEBPBP17676 345 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 PRPH2P23942 346 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 AQP4P55087 323 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 NME5P56597 212 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 UFM1P61960 85 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ELP6Q0PNE2 266 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 RALGDSQ12967 914 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ABRAXAS2Q15018 415 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 TLR1Q15399 786 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 SFT2D3Q587I9 215 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 MTX3Q5HYI7 312 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 IL23RQ5VWK5 629 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 TMEM215Q68D42 235 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 ZNF765Q7L2R6 523 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 HID1Q8IV36 788 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 FAM81AQ8TBF8 368 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 BTN2A2Q8WVV5 523 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 GLMNQ92990 594 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 METTL2AQ96IZ6 378 aaKnown RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 SLC45A3Q96JT2 553 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CDK15Q96Q40 435 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
SMG6-203ENST00000536871 GIMAP2Q9UG22 337 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 CCL27Q9Y4X3 112 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 SNX13Q9Y5W8 968 aa13.29□□□□□ -0.28
SMG6-203ENST00000536871 C16orf96A6NNT2 1141 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 TTC34A8MYJ7 566 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 MANBAO00462 879 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 AP1G1O43747 822 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 ATG13O75143 517 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 RSL1D1O76021 490 aaKnown RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 IL6P05231 212 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 LYNP07948 512 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 PRPS2P11908 318 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 VARSP26640 1264 aaKnown RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 MAP4P27816 1152 aaKnown RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 HTR1EP28566 365 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 PLOD1Q02809 727 aaPredicted RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 HSPA14Q0VDF9 509 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 LRRC36Q1X8D7 754 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 EML3Q32P44 896 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 TECPR1Q7Z6L1 1165 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 TMEM102Q8N9M5 508 aaPredicted RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 L3MBTL4Q8NA19 623 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 FAM156AQ8NDB6 213 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 OR8J3Q8NGG0 315 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 SMG7Q92540 1137 aaKnown RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 PPP1R16AQ96I34 528 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 PKP2Q99959 881 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 OSBPL6Q9BZF3 934 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 LMAN2LQ9H0V9 348 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 PCDHAC1Q9H158 963 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 ALG2Q9H553 416 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 LRTM1Q9HBL6 345 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 C1orf109Q9NX04 203 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 CMTM6Q9NX76 183 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 KLQ9UEF7 1012 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 ZNF490Q9ULM2 529 aaPredicted RBP13.28□□□□□ -0.28
SMG6-203ENST00000536871 HCFC2Q9Y5Z7 792 aa13.28□□□□□ -0.28
SMG6-203ENST00000536871 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 PER2O15055 1255 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 ELFN1P0C7U0 828 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 SLC2A4P14672 509 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 MSX2P35548 267 aaPredicted RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 IRS1P35568 1242 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 MMP12P39900 470 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 SLC6A12P48065 614 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 CAMK1Q14012 370 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 BOP1Q14137 746 aaKnown RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 PDGFRLQ15198 375 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 FXNQ16595 210 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 HSD11B1LQ7Z5J1 315 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 NLRP8Q86W28 1048 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 RASGRP3Q8IV61 690 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 KLHDC8AQ8IYD2 350 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 ST13P4Q8IZP2 240 aaPredicted RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 NAT16Q8N8M0 369 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms