RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 KIR2DS5Q14953 304 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 AMZ1Q400G9 498 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 ATP13A5Q4VNC0 1218 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 KHDC1Q4VXA5 237 aaKnown RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 ANKRD20A2Q5SQ80 823 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 ANKRD20A1Q5TYW2 823 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 ANKRD20A3Q5VUR7 823 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 DARS2Q6PI48 645 aaKnown RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 UNC5AQ6ZN44 842 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 CHST15Q7LFX5 561 aaPredicted RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 PIM3Q86V86 326 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 LRRTM4Q86VH4 590 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 KLHDC8BQ8IXV7 354 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 LILRA2Q8N149 483 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 FBXO39Q8N4B4 442 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 SLC25A41Q8N5S1 370 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 AVL9Q8NBF6 648 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 DTX3LQ8TDB6 740 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 BLOC1S5Q8TDH9 187 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 KCNE4Q8WWG9 221 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 TMEM159Q96B96 161 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 NAF1Q96HR8 494 aaKnown RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 HES6Q96HZ4 224 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 PPP1R2P1Q96PQ5 205 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 DPYSL5Q9BPU6 564 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 NUDT22Q9BRQ3 303 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 TIMM29Q9BSF4 260 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 RDH14Q9HBH5 336 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 BPIFA1Q9NP55 256 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 SARS2Q9NP81 518 aaKnown RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 IL26Q9NPH9 171 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.3
YBX3-206ENST00000536823 TBC1D29Q9UFV1 150 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 TMPRSS11EQ9UL52 423 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 PACSIN2Q9UNF0 486 aaPredicted RBP6.92□□□□□ -1.3
YBX3-206ENST00000536823 LOXL2Q9Y4K0 774 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 PCDHGA7Q9Y5G6 932 aa6.92□□□□□ -1.3
YBX3-206ENST00000536823 GLYATL1P3A0A0U1RQE8 302 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 C5orf60A6NFR6 353 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 LILRA5A6NI73 299 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 OR5K4A6NMS3 321 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 GAPDHSO14556 408 aaPredicted RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 HGSO14964 777 aaPredicted RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 STX7O15400 261 aaKnown RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 GPR39O43194 453 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 BUD23O43709 281 aaKnown RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 DUX1O43812 170 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 MTX2O75431 263 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 CDK14O94921 469 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 UBOX5O94941 541 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 AGTP01019 485 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 JMJD7P0C870 316 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 F3P13726 295 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 HGFP14210 728 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 ZNF7P17097 686 aaPredicted RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 PI3P19957 117 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 ETV5P41161 510 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 UCNP55089 124 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 UBE2IP63279 158 aaKnown RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 CFHR1Q03591 330 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 OLIG2Q13516 323 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 TRA2AQ13595 282 aaKnown RBP eCLIP6.91□□□□□ -1.3
YBX3-206ENST00000536823 GTF2H3Q13889 308 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 PRPSAP1Q14558 356 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 C16orf72Q14CZ0 275 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 TAF1AQ15573 450 aaPredicted RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 CHRNA6Q15825 494 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 FXNQ16595 210 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 INSCQ1MX18 579 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 LDLRAP1Q5SW96 308 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 PHF19Q5T6S3 580 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 BROXQ5VW32 411 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 IYDQ6PHW0 289 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 FAM151BQ6UXP7 276 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 RANBP10Q6VN20 620 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 SLC9B2Q86UD5 537 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 TRAPPC5Q8IUR0 188 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 ZNF547Q8IVP9 402 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 RNF10Q8N5U6 811 aaKnown RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 FAM71DQ8N9W8 422 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 CCDC112Q8NEF3 446 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 DDHD1Q8NEL9 900 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 OR4D9Q8NGE8 314 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 SLC35B2Q8TB61 432 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 CCDC110Q8TBZ0 833 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 TBL1YQ9BQ87 522 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 DPH2Q9BQC3 489 aaPredicted RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 TRIM55Q9BYV6 548 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 DPH1Q9BZG8 443 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 OSGEPL1Q9H4B0 414 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 PRORYQ9H606 182 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 STN1Q9H668 368 aaKnown RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 KLC4Q9NSK0 619 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 SMOXQ9NWM0 555 aa6.91□□□□□ -1.3
YBX3-206ENST00000536823 AKAP7Q9P0M2 348 aaPredicted RBP6.91□□□□□ -1.3
YBX3-206ENST00000536823 PISDQ9UG56 409 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms