RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GBP5Q96PP8 586 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 PPP1R9BQ96SB3 815 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 PLIN2Q99541 437 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 RAB34Q9BZG1 259 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 LSG1Q9H089 658 aaKnown RBP3.87□□□□□ -1.79
YBX3-205ENST00000536107 BRD8Q9H0E9 1235 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 ZBTB20Q9HC78 741 aaPredicted RBP3.87□□□□□ -1.79
YBX3-205ENST00000536107 CSNK1G1Q9HCP0 422 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 ANLNQ9NQW6 1124 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 OLA1Q9NTK5 396 aaKnown RBP3.87□□□□□ -1.79
YBX3-205ENST00000536107 SPATS2LQ9NUQ6 558 aaKnown RBP3.87□□□□□ -1.79
YBX3-205ENST00000536107 LRFN1Q9P244 771 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 IL36AQ9UHA7 158 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 STOML2Q9UJZ1 356 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 LUC7L2Q9Y383 392 aaKnown RBP3.87□□□□□ -1.79
YBX3-205ENST00000536107 PLEKHM1Q9Y4G2 1056 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 OR1A2Q9Y585 309 aa3.87□□□□□ -1.79
YBX3-205ENST00000536107 HHLA1C9JL84 531 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 CACNB4O00305 520 aaPredicted RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 PEX12O00623 359 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 PPM1DO15297 605 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 AP1G1O43747 822 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 STX6O43752 255 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 SLC19A2O60779 497 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TBCAO75347 108 aaKnown RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 RASSF9O75901 435 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TM7SF2O76062 418 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 LY86O95711 162 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 MOCS2O96007 188 aaPredicted RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 PCCBP05166 539 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 FGF1P05230 155 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 ELANEP08246 267 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TRIM49P0CI25 452 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TRIM49CP0CI26 452 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 DLATP10515 647 aaKnown RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 TNNI1P19237 187 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 OTX2P32243 289 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 NDST2P52849 883 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 DEFA6Q01524 100 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 ILF3Q12906 894 aaKnown RBP eCLIP3.86□□□□□ -1.79
YBX3-205ENST00000536107 STK3Q13188 491 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 SQSTM1Q13501 440 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 RAPGEF1Q13905 1077 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 IL11RAQ14626 422 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 NR1D2Q14995 579 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 IRF4Q15306 451 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 C3AR1Q16581 482 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 KLHL40Q2TBA0 621 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 KRTAP24-1Q3LI83 254 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 ADCK5Q3MIX3 580 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 FAM133BQ5BKY9 247 aaKnown RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 EFHC1Q5JVL4 640 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TTC22Q5TAA0 569 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 IRAK1BP1Q5VVH5 260 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 SHEQ5VZ18 495 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 B3GNTL1Q67FW5 361 aaPredicted RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 FOXR2Q6PJQ5 311 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 SLC30A9Q6PML9 568 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 CLEC20AQ6ZU45 233 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TRAPPC11Q7Z392 1133 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 PPP1R3BQ86XI6 285 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 RAB43Q86YS6 212 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 SYCP3Q8IZU3 236 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 LGI2Q8N0V4 545 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 RYBPQ8N488 228 aaPredicted RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 ZSWIM2Q8NEG5 633 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 OR2A12Q8NGT7 310 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 ADAMTS18Q8TE60 1221 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 COG1Q8WTW3 980 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 PATE1Q8WXA2 126 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 OR1E3Q8WZA6 343 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TAF4BQ92750 862 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 RPL36ALQ969Q0 106 aaKnown RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 CDK5RAP3Q96JB5 506 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 MAGED4Q96JG8 741 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 EXOC2Q96KP1 924 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 FER1L6-AS2Q96M78 137 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 PRICKLE1Q96MT3 831 aaPredicted RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 FEM1AQ9BSK4 669 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 WRAP53Q9BUR4 548 aaKnown RBP3.86□□□□□ -1.79
YBX3-205ENST00000536107 APOOQ9BUR5 198 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 SMYD3Q9H7B4 428 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 PARVGQ9HBI0 331 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 LRTM1Q9HBL6 345 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 PDP2Q9P2J9 529 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 TINAGQ9UJW2 476 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 VPS28Q9UK41 221 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 ITM2BQ9Y287 266 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 CSAG2Q9Y5P2 127 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 NOX1Q9Y5S8 564 aa3.86□□□□□ -1.79
YBX3-205ENST00000536107 UNC13CQ8NB66 2214 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 FAM237BA0A1B0GVD1 139 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 RNF103O00237 685 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CTAG2O75638 210 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CLEC2LP0C7M8 214 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 CCNB1P14635 433 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 BRAFP15056 766 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 GPD1P21695 349 aa3.85□□□□□ -1.79
YBX3-205ENST00000536107 KELP23276 732 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms