RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CCSMST1Q4G0I0 132 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 PLEKHS1Q5SXH7 462 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 C3orf62Q6ZUJ4 267 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 CD200R1Q8TD46 325 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 LIN37Q96GY3 246 aaPredicted RBP17.39■□□□□ 0.37
DDX55-204ENST00000536079 TMEM74Q96NL1 305 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 MCMBPQ9BTE3 642 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 PHACTR1Q9C0D0 580 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 NRSN2Q9GZP1 204 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 ICKQ9UPZ9 632 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 MN1Q10571 1320 aaPredicted RBP17.39■□□□□ 0.37
DDX55-204ENST00000536079 E5RI56 91 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 ZW10O43264 779 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 BRINP1O60477 761 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 CCL4P13236 92 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 ITIH1P19827 911 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 NDUFS1P28331 727 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 BDKRB1P46663 353 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.372e-11■■■■■ 32.6
DDX55-204ENST00000536079 TMED2Q15363 201 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 FBXO38Q6PIJ6 1188 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 FOXR1Q6PIV2 292 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 FAM92BQ6ZTR7 304 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 KIAA0408Q6ZU52 694 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 ARHGAP22Q7Z5H3 698 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 STRA8Q7Z7C7 330 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 GALNT7Q86SF2 657 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 TBC1D21Q8IYX1 336 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 OR5K2Q8NHB8 316 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 ZFPM2Q8WW38 1151 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 KCNJ9Q92806 393 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 OLFM1Q99784 485 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 MENTQ9BUN1 341 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 TDRKHQ9Y2W6 561 aaKnown RBP17.38■□□□□ 0.37
DDX55-204ENST00000536079 DHRS7Q9Y394 339 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 LOXL2Q9Y4K0 774 aa17.38■□□□□ 0.37
DDX55-204ENST00000536079 CHD8Q9HCK8 2581 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 CCDC187A0A096LP49 1063 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 OR5K3A6NET4 321 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 TAF4O00268 1085 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 BTN3A1O00481 513 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 POLR2CP19387 275 aaPredicted RBP17.37■□□□□ 0.37
DDX55-204ENST00000536079 LSSP48449 732 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 HECTD2Q5U5R9 776 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 IRGCQ6NXR0 463 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 CYHR1Q6ZMK1 362 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 RAB11FIP2Q7L804 512 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 CPNE9Q8IYJ1 553 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 FBF1Q8TES7 1133 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 LCN9Q8WX39 176 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 PMEPA1Q969W9 287 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 IL17FQ96PD4 163 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 TRIT1Q9H3H1 467 aaKnown RBP17.37■□□□□ 0.37
DDX55-204ENST00000536079 EPB41L1Q9H4G0 881 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 TFB2MQ9H5Q4 396 aaKnown RBP17.37■□□□□ 0.37
DDX55-204ENST00000536079 POLR1BQ9H9Y6 1135 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 HRASLS2Q9NWW9 162 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 OCIAD1Q9NX40 245 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 NINJ2Q9NZG7 142 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 ZFATQ9P243 1243 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 EPHA6Q9UF33 1036 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 AK5Q9Y6K8 562 aa17.37■□□□□ 0.37
DDX55-204ENST00000536079 FAM159BA6NKW6 160 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 KPNA5O15131 536 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 FAM155BO75949 473 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 MATN4O95460 622 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 C1orf105O95561 183 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 FGF3P11487 239 aaPredicted RBP17.36■□□□□ 0.37
DDX55-204ENST00000536079 MCM3P25205 808 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 KPNA2P52292 529 aaKnown RBP17.36■□□□□ 0.37
DDX55-204ENST00000536079 KYNUQ16719 465 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 KLHL38Q2WGJ6 581 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 PAQR3Q6TCH7 311 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 ZC3HC1Q86WB0 502 aaKnown RBP17.36■□□□□ 0.37
DDX55-204ENST00000536079 PLXDC1Q8IUK5 500 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 ADGRF3Q8IZF5 1079 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 FBXO39Q8N4B4 442 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 WDR36Q8NI36 951 aaKnown RBP17.36■□□□□ 0.37
DDX55-204ENST00000536079 INPP5DQ92835 1189 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 GRAMD1AQ96CP6 724 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 DPYSL5Q9BPU6 564 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 STRADBQ9C0K7 418 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 CCDC68Q9H2F9 335 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 SRMSQ9H3Y6 488 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 ASCL3Q9NQ33 180 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 SPHK1Q9NYA1 384 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 NFU1Q9UMS0 254 aa17.36■□□□□ 0.37
DDX55-204ENST00000536079 IGHV5-51A0A0C4DH38 117 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 TMX2-CTNND1H3BSU7 103 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 PLD2O14939 933 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 FDXRP22570 491 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 ATP5DP30049 168 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 PEBP1P30086 187 aaKnown RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 KBTBD12Q3ZCT8 623 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 DNTTIP2Q5QJE6 756 aaKnown RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 TMEM207Q6UWW9 146 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms