RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ENPP7Q6UWV6 458 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 RIPOR1Q6ZS17 1223 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 DET1Q7L5Y6 550 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 RABEPKQ7Z6M1 372 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 C11orf96Q7Z7L8 435 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 LRRTM4Q86VH4 590 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 RBM12BQ8IXT5 1001 aaKnown RBP12.06□□□□□ -0.48
SCARB1-204ENST00000535005 ULK2Q8IYT8 1036 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 OXR1Q8N573 874 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 OR1E3Q8WZA6 343 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 TSPAN17Q96FV3 270 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 ATXN7L3BQ96GX2 97 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 ELMO2Q96JJ3 720 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 PANX3Q96QZ0 392 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 POPDC3Q9HBV1 291 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 TAS2R13Q9NYV9 303 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 PTTG2Q9NZH5 202 aa12.06□□□□□ -0.48
SCARB1-204ENST00000535005 TNRC6BQ9UPQ9 1833 aaKnown RBP12.06□□□□□ -0.48
SCARB1-204ENST00000535005 C17orf113A0A1B0GUU1 675 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 PRSS38A1L453 326 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 OR2AG2A6NM03 316 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 TRIM49D1C9J1S8 452 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 KMOO15229 486 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 GRID2O43424 1007 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 KCNJ13O60928 360 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 NIPSNAP2O75323 286 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 VPS26AO75436 327 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 MYL2P10916 166 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 CDKN2DP55273 166 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 SRP54P61011 504 aaKnown RBP12.05□□□□□ -0.48
SCARB1-204ENST00000535005 BMPR2Q13873 1038 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 USP10Q14694 798 aaKnown RBP12.05□□□□□ -0.48
SCARB1-204ENST00000535005 ALG11Q2TAA5 492 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 ZNF658BQ4V348 819 aaPredicted RBP12.05□□□□□ -0.48
SCARB1-204ENST00000535005 PYCR3Q53H96 274 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 PDSS2Q86YH6 399 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 OR6Y1Q8NGX8 325 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 NAT14Q8WUY8 206 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 OLFM1Q99784 485 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 CCM2Q9BSQ5 444 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 TMEM74BQ9NUR3 256 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.05□□□□□ -0.48
SCARB1-204ENST00000535005 KLQ9UEF7 1012 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 SLC39A10Q9ULF5 831 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 DHRS7Q9Y394 339 aa12.05□□□□□ -0.48
SCARB1-204ENST00000535005 KPNA5O15131 536 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 RFPL1O75677 317 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 POP7O75817 140 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 WISP3O95389 354 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 ALDOAP04075 364 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SERPINA6P08185 405 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 UBTFL6P0CB48 400 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CHRM3P20309 590 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SERPINB8P50452 374 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CLCN7P51798 805 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 RAB10P61026 200 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 TCF15Q12870 199 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 EIF2B5Q13144 721 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 MED21Q13503 144 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 UGT3A1Q6NUS8 523 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PRR23BQ6ZRT6 265 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 DHDDSQ86SQ9 333 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PARGQ86W56 976 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 GALNT13Q8IUC8 556 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 TRAPPC5Q8IUR0 188 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PRSS33Q8NF86 280 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CEP76Q8TAP6 659 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 LKAAEAR1Q8TD35 194 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PIGKQ92643 395 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 GFM2Q969S9 779 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 TIMM29Q9BSF4 260 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 IQCGQ9H095 443 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 IRF2BPLQ9H1B7 796 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 KCNH6Q9H252 994 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 ERVMER34-1Q9H9K5 563 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 TRNAU1APQ9NX07 287 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PNMA8BQ9ULN7 279 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PCDHGA5Q9Y5G8 931 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PCYT1BQ9Y5K3 369 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 R4GN57 208 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SDK1Q7Z5N4 2213 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 MGAT4DA6NG13 374 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PRR19A6NJB7 356 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 IQCF5A8MTL0 148 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 E5RI56 91 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 BIRC5O15392 142 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CCNT2O60583 730 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 EPN2O95208 641 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 RASGRP1O95267 797 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 TRIM16O95361 564 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CCDC166P0CW27 439 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 UQCRBP14927 111 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 STMN1P16949 149 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 AOAHP28039 575 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CCR7P32248 378 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CCNFP41002 786 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CTSKP43235 329 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SLC12A2P55011 1212 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms