RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 PMPCBO75439 489 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 ALDH1A2O94788 518 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 PRAMEF12O95522 483 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 CYP51A1Q16850 503 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 TMEM240Q5SV17 173 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 STEAP4Q687X5 459 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 SEL1L3Q68CR1 1132 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 KLHDC8BQ8IXV7 354 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 SPATA6LQ8N4H0 392 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 ARL14EPQ8N8R7 260 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 SPPL2BQ8TCT7 592 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 FUBP1Q96AE4 644 aaKnown RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 PHF21AQ96BD5 680 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 FUNDC2Q9BWH2 189 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 UCK2Q9BZX2 261 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 COMMD8Q9NX08 183 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 HCN4Q9Y3Q4 1203 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 DRGXA6NNA5 263 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 HACD1B0YJ81 288 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 F11P03951 625 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 HSMCR30P0CW71 290 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 BMP4P12644 408 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 HDCP19113 662 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 DDCP20711 480 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 KCNA5P22460 613 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 SLC18A1P54219 525 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 NTHL1P78549 312 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 GALK2Q01415 458 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 PPP1R8Q12972 351 aaKnown RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 GPR68Q15743 365 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 BRMS1LQ5PSV4 323 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 GARNL3Q5VVW2 1013 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 CXorf57Q6NSI4 855 aaKnown RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 ESRP1Q6NXG1 681 aaKnown RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 MINDY2Q8NBR6 621 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 VANGL1Q8TAA9 524 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 HERVK_113Q902F9 699 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 RPL10LQ96L21 214 aaKnown RBP8.88□□□□□ -0.99
SF3B2-216ENST00000534765 SERPINB11Q96P15 392 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 ZBP1Q9H171 429 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 CDYLQ9Y232 598 aa8.88□□□□□ -0.99
SF3B2-216ENST00000534765 PLK4O00444 970 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PLD2O14939 933 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PER2O15055 1255 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 MPSTP25325 297 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 SLC7A2P52569 658 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 EFR3AQ14156 821 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PGM2L1Q6PCE3 622 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 KDELC1Q6UW63 502 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 SLC51BQ86UW2 128 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 LINC00469Q8N7U9 141 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PDPRQ8NCN5 879 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 IPMKQ8NFU5 416 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 CDKL2Q92772 493 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ROGDIQ9GZN7 287 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 RERGLQ9H628 205 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 EXOSC4Q9NPD3 245 aaKnown RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 IPO11Q9UI26 975 aaKnown RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 MAN2B2Q9Y2E5 1009 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PDPK1O15530 556 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 MOSPD3O75425 235 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF26P17031 533 aaPredicted RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 TACR2P21452 398 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 GKP32189 559 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ARSDP51689 593 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 AIF1P55008 147 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 IL5RAQ01344 420 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 SLC12A1Q13621 1099 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 NDNFQ8TB73 568 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 C1orf74Q96LT6 269 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 LRRC3BQ96PB8 259 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 TNKS2Q9H2K2 1166 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 FBXO44Q9H4M3 255 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 WASH6PQ9NQA3 447 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 RBM22Q9NW64 420 aaKnown RBP eCLIP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 TMEM248Q9NWD8 314 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 CACNA2D2Q9NY47 1150 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 AP3M1Q9Y2T2 418 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 BACE2Q9Y5Z0 518 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 MATN3O15232 486 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 MED26O95402 600 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 CD40LGP29965 261 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 CORO1AP31146 461 aaKnown RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 CCR10P46092 362 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 MPP1Q00013 466 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 BTN1A1Q13410 526 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF697Q5TEC3 545 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PPP4R4Q6NUP7 873 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 CCDC149Q6ZUS6 474 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ZNF366Q8N895 744 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ASZ1Q8WWH4 475 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 TANKQ92844 425 aa8.87□□□□□ -0.99
SF3B2-216ENST00000534765 PABPC5Q96DU9 382 aaKnown RBP8.87□□□□□ -0.99
SF3B2-216ENST00000534765 ZSWIM3Q96MP5 696 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms