RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 HSPA14Q0VDF9 509 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 FRG1Q14331 258 aaKnown RBP20.74■□□□□ 0.91
PKP3-211ENST00000534401 KRT33BQ14525 404 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 STEAP4Q687X5 459 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 ZNF470Q6ECI4 717 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 IRGCQ6NXR0 463 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 DENND6AQ8IWF6 608 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 ADGRF3Q8IZF5 1079 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 PDIK1LQ8N165 341 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.74■□□□□ 0.912e-6■■■■■ 45.7
PKP3-211ENST00000534401 OR4E2Q8NGC2 313 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 CALML6Q8TD86 181 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 SNRNP27Q8WVK2 155 aaKnown RBP20.74■□□□□ 0.91
PKP3-211ENST00000534401 HNRNPLLQ8WVV9 542 aaKnown RBP20.74■□□□□ 0.91
PKP3-211ENST00000534401 LCN9Q8WX39 176 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 NRTNQ99748 197 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 MAP3K3Q99759 626 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 ERP44Q9BS26 406 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 MENTQ9BUN1 341 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 ZMYND15Q9H091 742 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 ICKQ9UPZ9 632 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 ASF1AQ9Y294 204 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 MED16Q9Y2X0 877 aa20.74■□□□□ 0.91
PKP3-211ENST00000534401 UBA6A0AVT1 1052 aaPredicted RBP20.73■□□□□ 0.91
PKP3-211ENST00000534401 EFCAB8A8MWE9 144 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 AGRPO00253 132 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 BTN3A3O00478 584 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 BANF1O75531 89 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 SNRNP200O75643 2136 aaKnown RBP20.73■□□□□ 0.91
PKP3-211ENST00000534401 LIPCP11150 499 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 ATP5DP30049 168 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 FMO4P31512 558 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 KPNA2P52292 529 aaKnown RBP20.73■□□□□ 0.91
PKP3-211ENST00000534401 THOC5Q13769 683 aaKnown RBP20.73■□□□□ 0.91
PKP3-211ENST00000534401 GRB7Q14451 532 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 COL28A1Q2UY09 1125 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 SYTL3Q4VX76 610 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 SPANXN3Q5MJ09 141 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 DCAF12Q5T6F0 453 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 DUPD1Q68J44 220 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 ZNF549Q6P9A3 640 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 UNC5DQ6UXZ4 953 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 FAM92BQ6ZTR7 304 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 MAATS1Q7Z4T9 603 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 CNTN4Q8IWV2 1026 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 PWWP2AQ96N64 755 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 TRIT1Q9H3H1 467 aaKnown RBP20.73■□□□□ 0.91
PKP3-211ENST00000534401 SRMSQ9H3Y6 488 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 PRORYQ9H606 182 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 C20orf96Q9NUD7 363 aaPredicted RBP20.73■□□□□ 0.91
PKP3-211ENST00000534401 FBXO5Q9UKT4 447 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 CRYL1Q9Y2S2 319 aa20.73■□□□□ 0.91
PKP3-211ENST00000534401 BTN3A1O00481 513 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 NDC80O14777 642 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 RAD51CO43502 376 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 NIPSNAP2O75323 286 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 SLC1A2P43004 574 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 PRKG2Q13237 762 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 CTBP1Q13363 440 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 TMED2Q15363 201 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 KYNUQ16719 465 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 BBS9Q3SYG4 887 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 ANKS6Q68DC2 871 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 C19orf48Q6RUI8 117 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 CEACAM20Q6UY09 585 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 GALNT7Q86SF2 657 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 AMIGO1Q86WK6 493 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 ZFAND4Q86XD8 727 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 FAM129CQ86XR2 697 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 UNC5BQ8IZJ1 945 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 D2HGDHQ8N465 521 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 OTUD6BQ8N6M0 293 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 FAM167BQ9BTA0 163 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 HGH1Q9BTY7 390 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 PITPNM3Q9BZ71 974 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 APMAPQ9HDC9 416 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 C1GALT1Q9NS00 363 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 WHRNQ9P202 907 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 GALPQ9UBC7 116 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 CDC23Q9UJX2 597 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 BTRCQ9Y297 605 aa20.72■□□□□ 0.91
PKP3-211ENST00000534401 TMEM184BQ9Y519 407 aaPredicted RBP20.72■□□□□ 0.91
PKP3-211ENST00000534401 SPTBP11277 2137 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 MGAQ8IWI9 3026 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 SEC16AO15027 2179 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 KLK10O43240 276 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 FGF5P12034 268 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 POLR2CP19387 275 aaPredicted RBP20.71■□□□□ 0.91
PKP3-211ENST00000534401 ELK3P41970 407 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 CLCN7P51798 805 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 UCNP55089 124 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 IL11RAQ14626 422 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 HIF1AQ16665 826 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 HSP90AA5PQ58FG0 334 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 DNTTIP2Q5QJE6 756 aaKnown RBP20.71■□□□□ 0.91
PKP3-211ENST00000534401 OTOAQ7RTW8 1153 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 KCNMB4Q86W47 210 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 RASGRP3Q8IV61 690 aa20.71■□□□□ 0.91
PKP3-211ENST00000534401 C2CD4AQ8NCU7 369 aaPredicted RBP20.71■□□□□ 0.91
PKP3-211ENST00000534401 BBOF1Q8ND07 529 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms