RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
CAPRIN1-216ENST00000534042 EFR3BQ9Y2G0 817 aa16.35■□□□□ 0.21
CAPRIN1-216ENST00000534042 PADI2Q9Y2J8 665 aa16.35■□□□□ 0.21
CAPRIN1-216ENST00000534042 PCDHA13Q9Y5I0 950 aa16.35■□□□□ 0.21
CAPRIN1-216ENST00000534042 IGLV3-16A0A075B6K0 115 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 ZNF749O43361 778 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 ACRV1P26436 265 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 VARSP26640 1264 aaKnown RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 PDHA2P29803 388 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 CDKN1CP49918 316 aaPredicted RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 RPA4Q13156 261 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 PRKG2Q13237 762 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 ATP1A4Q13733 1029 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 SPARCL1Q14515 664 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 SPA17Q15506 151 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 ZRANB3Q5FWF4 1079 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 HIST2H2BCQ6DN03 193 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 DENND5AQ6IQ26 1287 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 TAS2R42Q7RTR8 314 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 SERPINA9Q86WD7 417 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 GPR135Q8IZ08 494 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 GLIS1Q8NBF1 620 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 TFGQ92734 400 aaPredicted RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 N4BP2L2Q92802 583 aaPredicted RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 SGSM3Q96HU1 749 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 DNAJC1Q96KC8 554 aaKnown RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 FAM118BQ9BPY3 351 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 HGH1Q9BTY7 390 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 SLC29A3Q9BZD2 475 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 XKR8Q9H6D3 395 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 ARNT2Q9HBZ2 717 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 ACTR10Q9NZ32 417 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 MAP10Q9P2G4 905 aa16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 SNRNP200O75643 2136 aaKnown RBP16.34■□□□□ 0.21
CAPRIN1-216ENST00000534042 TRBV5-4A0A0C4DH59 114 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 PJA2O43164 708 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 LDB2O43679 373 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 CTNNA1P35221 906 aaKnown RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 ZNF658BQ4V348 819 aaPredicted RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 PRR30Q53SZ7 412 aaPredicted RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 SLC6A19Q695T7 634 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 CDHR3Q6ZTQ4 885 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 ADGRF3Q8IZF5 1079 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 RBMXL3Q8N7X1 1067 aaKnown RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 Q8NA96 180 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 PNPLA2Q96AD5 504 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 SMAD5Q99717 465 aaKnown RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 DHRS4Q9BTZ2 278 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 TSPY26PQ9H489 355 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 CUEDC1Q9NWM3 386 aaPredicted RBP16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 PCDHA3Q9Y5H8 950 aa16.33■□□□□ 0.2
CAPRIN1-216ENST00000534042 SEMA7AO75326 666 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 GSTM1P09488 218 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 OTX2P32243 289 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 PTPN7P35236 360 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 CETN2P41208 172 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 GSTM4Q03013 218 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 ZNF385CQ66K41 422 aaPredicted RBP16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 SPESP1Q6UW49 350 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 CCDC170Q8IYT3 715 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 CLDN19Q8N6F1 224 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 RNF214Q8ND24 703 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.32■□□□□ 0.21e-7■■■■■ 35.3
CAPRIN1-216ENST00000534042 IP6K3Q96PC2 410 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 C17orf62Q9BQA9 187 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 CASS4Q9NQ75 786 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 GPN3Q9UHW5 284 aaPredicted RBP16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 AP1M2Q9Y6Q5 423 aa16.32■□□□□ 0.2
CAPRIN1-216ENST00000534042 PRRC2CQ9Y520 2896 aaKnown RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 TCP11X1B4DZS4 312 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 H7C0S8 307 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 ZNF189O75820 626 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 OR2B3O76000 313 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 AP2A2O94973 939 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 TJP3O95049 919 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 SHMT2P34897 504 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 NAP1L1P55209 391 aaKnown RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 CACNG1Q06432 222 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 RAPSNQ13702 412 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 SSPNQ14714 243 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 KYNUQ16719 465 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 EIF2S3LQ2VIR3 472 aaKnown RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 MLIPQ5VWP3 458 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 TCTN2Q96GX1 697 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 FAM60AQ9NP50 221 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 NLE1Q9NVX2 485 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 C5AR2Q9P296 337 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 ICKQ9UPZ9 632 aa16.31■□□□□ 0.2
CAPRIN1-216ENST00000534042 CREBBPQ92793 2442 aa16.3■□□□□ 0.2
CAPRIN1-216ENST00000534042 LIN7AO14910 233 aaPredicted RBP16.3■□□□□ 0.2
CAPRIN1-216ENST00000534042 KLF7O75840 302 aaPredicted RBP16.3■□□□□ 0.2
CAPRIN1-216ENST00000534042 PRSS56P0CW18 603 aa16.3■□□□□ 0.2
CAPRIN1-216ENST00000534042 CBSLP0DN79 551 aa16.3■□□□□ 0.2
CAPRIN1-216ENST00000534042 UGT2B7P16662 529 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms