RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 LY6DQ14210 128 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 SIX1Q15475 284 aaPredicted RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 C16orf46Q6P387 395 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 CCDC137Q6PK04 289 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 OTOAQ7RTW8 1153 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 TIPARPQ7Z3E1 657 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 PCGF5Q86SE9 256 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 RASGEF1CQ8N431 466 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 PRELID2Q8N945 189 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 MCUQ8NE86 351 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 OR52E1Q8NGJ3 308 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 OR5K2Q8NHB8 316 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 CALML6Q8TD86 181 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 SKA2Q8WVK7 121 aaPredicted RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 APOBEC4Q8WW27 367 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 EXTL1Q92935 676 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 TCTN2Q96GX1 697 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 C17orf62Q9BQA9 187 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 KIFC1Q9BW19 673 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 XAB2Q9HCS7 855 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 LHX9Q9NQ69 397 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 LATS2Q9NRM7 1088 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 INTS7Q9NVH2 962 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 GEMIN8Q9NWZ8 242 aaKnown RBP9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 SLC2A6Q9UGQ3 507 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 BTRCQ9Y297 605 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 AP1M2Q9Y6Q5 423 aa9.34□□□□□ -0.91
FOXRED1-216ENST00000533839 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.92
FOXRED1-216ENST00000533839 ISM1B1AKI9 464 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 NKX2-8O15522 239 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 OR1I1O60431 355 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 SCRG1O75711 98 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 FKBP9O95302 570 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 MSL3P1P0C860 447 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 EBLN1P0CF75 366 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PRSS56P0CW18 603 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 TCP1P17987 556 aaKnown RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 CHRM3P20309 590 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 CYP2A7P20853 494 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 RPS3P23396 243 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■■□□□ 12.2
FOXRED1-216ENST00000533839 MGAT1P26572 445 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 ACADLP28330 430 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 COILP38432 576 aaPredicted RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 CCNFP41002 786 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 KPNA2P52292 529 aaKnown RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 ABRQ12979 859 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 KIR2DS3Q14952 304 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PPP1R7Q15435 360 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 TRIP13Q15645 432 aaPredicted RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PLEKHS1Q5SXH7 462 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PWWP2BQ6NUJ5 590 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 DUS1LQ6P1R4 473 aaKnown RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 UNC5DQ6UXZ4 953 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 UNC5AQ6ZN44 842 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PRUNE1Q86TP1 453 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 LMNTD2Q8IXW0 634 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 SLC22A15Q8IZD6 547 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 ZNF843Q8N446 348 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 LILRA3Q8N6C8 439 aaPredicted RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 CFAP61Q8NHU2 1237 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 ACTRT1Q8TDG2 376 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 NAT14Q8WUY8 206 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 STARD8Q92502 1023 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 RAD51AP1Q96B01 352 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 CLIP3Q96DZ5 547 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 RUNDC3BQ96NL0 473 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 DPH2Q9BQC3 489 aaPredicted RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 HGH1Q9BTY7 390 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 RAB11FIP5Q9BXF6 653 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 AP1M1Q9BXS5 423 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 SLC25A18Q9H1K4 315 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 ACTR10Q9NZ32 417 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 POMT2Q9UKY4 750 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 SOX13Q9UN79 622 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 POLHQ9Y253 713 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 FARSAQ9Y285 508 aaKnown RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 PRSS21Q9Y6M0 314 aa9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 ZFC3H1O60293 1989 aaKnown RBP9.33□□□□□ -0.92
FOXRED1-216ENST00000533839 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 FAM237BA0A1B0GVD1 139 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 E5RI56 91 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 E7EQ34 232 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 BTN3A3O00478 584 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 BTN3A1O00481 513 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 GPC4O75487 556 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 SLCO2B1O94956 709 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 ESR1P03372 595 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 PRB1P04280 392 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 NTRK1P04629 796 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 ITGB6P18564 788 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 AOAHP28039 575 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 NMBRP28336 390 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 CCR7P32248 378 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
FOXRED1-216ENST00000533839 MAGEA6P43360 314 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms