RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 IL6P05231 212 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 UROSP10746 265 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 SHMT2P34897 504 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 CYP4F2P78329 520 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 BNIP2Q12982 314 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 DGCR6Q14129 220 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 ABRAXAS1Q6UWZ7 409 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 PLEKHO2Q8TD55 490 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 UTP15Q8TED0 518 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 MFSD3Q96ES6 412 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 PSKH2Q96QS6 385 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 BRINP2Q9C0B6 783 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 EPB41L4BQ9H329 900 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 EHD3Q9NZN3 535 aa11.08□□□□□ -0.64
AMBRA1-211ENST00000533727 CHURC1-FNTBB4DL54 471 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 APBB3O95704 486 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 FECHP22830 423 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 DNAJB1P25685 340 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 MAGEA10P43363 369 aaPredicted RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 SCAPQ12770 1279 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ALFQ53S48 1182 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 LRRC4CQ9HCJ2 640 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ZSCAN32Q9NX65 697 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 GTF2A1LQ9UNN4 478 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 RNGTTO60942 597 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 NTRK1P04629 796 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 NMBRP28336 390 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 CLCNKAP51800 687 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF155Q12901 538 aaPredicted RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 GTF2H2Q13888 395 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 TCEAL1Q15170 157 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 CHRNA6Q15825 494 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 SIRPB2Q5JXA9 342 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 GTF2H2CQ6P1K8 395 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ZYG11AQ6WRX3 759 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 TRABD2AQ86V40 505 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 RALGPS2Q86X27 583 aaPredicted RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 GATAD2AQ86YP4 633 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 DCUN1D3Q8IWE4 304 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ATG10Q9H0Y0 220 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 SSU72Q9NP77 194 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 B4GALT6Q9UBX8 382 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 RUVBL1Q9Y265 456 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 AP4B1Q9Y6B7 739 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 MAST2Q6P0Q8 1798 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 HOXD13P35453 343 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 KIR3DL1P43629 444 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 AKR1D1P51857 326 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ARPC4P59998 168 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 TAF13Q15543 124 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 C10orf62Q5T681 223 aaPredicted RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 LRRC66Q68CR7 880 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 MZT2BQ6NZ67 158 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 C15orf39Q6ZRI6 1047 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 LRRC70Q7Z2Q7 622 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PEX5LQ8IYB4 626 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 CPNE9Q8IYJ1 553 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC43A3Q8NBI5 491 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM13CQ8NE31 585 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 OR4A15Q8NGL6 344 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 WDR36Q8NI36 951 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 RP9Q8TA86 221 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PSMA8Q8TAA3 256 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PIF1Q9H611 641 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 MAGEE1Q9HCI5 957 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 DUSP12Q9UNI6 340 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 J3KR12 359 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC22A3O75751 556 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PGLSO95336 258 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 CCNYL3P0C7X3 344 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 HLA-EP13747 358 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 CPN2P22792 545 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 IL12AP29459 219 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 BST1Q10588 318 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 LARS2Q15031 903 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PRAMEF14Q5SWL7 426 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 GPR107Q5VW38 600 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PRAMEF13Q5VWM6 474 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 MBOAT1Q6ZNC8 495 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 CMC1Q7Z7K0 106 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 ULK2Q8IYT8 1036 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 TRAM1L1Q8N609 369 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 HPS1Q92902 700 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 OR52E6Q96RD3 313 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 OSBPL11Q9BXB4 747 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 PRDM8Q9NQV8 689 aa11.07□□□□□ -0.64
AMBRA1-211ENST00000533727 TMX2-CTNND1H3BSU7 103 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 BPGMP07738 259 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CXCL12P48061 93 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CLDN10P78369 228 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 DPY19L1Q2PZI1 675 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MPP7Q5T2T1 576 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 PIK3R6Q5UE93 754 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ZC3H7AQ8IWR0 971 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CPXM2Q8N436 756 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM174AQ8TBP5 190 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms