RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CEP250Q9BV73 2442 aa17.02■□□□□ 0.32
NXF1-216ENST00000533499 A0A096LPK6 155 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 LY6G6EA0A0G2JKS1 128 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 HMX2A2RU54 273 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 CBFA2T3O75081 653 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 GLB1P16278 677 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 CD9P21926 228 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 MAP4P27816 1152 aaKnown RBP17.01■□□□□ 0.31
NXF1-216ENST00000533499 OR1D5P58170 312 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 GPR18Q14330 331 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 CSHL1Q14406 222 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 GBX1Q14549 363 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 KRT71Q3SY84 523 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 PPM1JQ5JR12 505 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 PERM1Q5SV97 790 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 LRRC8EQ6NSJ5 796 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 UNC5DQ6UXZ4 953 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 OR6C4Q8NGE1 309 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 ANKRD49Q8WVL7 239 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 AHCYL2Q96HN2 611 aaKnown RBP17.01■□□□□ 0.31
NXF1-216ENST00000533499 TBC1D10AQ9BXI6 508 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 ABCG4Q9H172 646 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 PPCSQ9HAB8 311 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 ACOT9Q9Y305 439 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 U3KQA8 63 aa17.01■□□□□ 0.31
NXF1-216ENST00000533499 ANKRD12Q6UB98 2062 aa17■□□□□ 0.31
NXF1-216ENST00000533499 PIEZO1Q92508 2521 aa17■□□□□ 0.31
NXF1-216ENST00000533499 DCDC2BA2VCK2 349 aa17■□□□□ 0.31
NXF1-216ENST00000533499 EME2A4GXA9 379 aaPredicted RBP17■□□□□ 0.31
NXF1-216ENST00000533499 NPEPPSL1A6NEC2 478 aa17■□□□□ 0.31
NXF1-216ENST00000533499 GOLGA8RI6L899 631 aa17■□□□□ 0.31
NXF1-216ENST00000533499 BTN3A1O00481 513 aa17■□□□□ 0.31
NXF1-216ENST00000533499 NUDT21O43809 227 aaKnown RBP17■□□□□ 0.31
NXF1-216ENST00000533499 CDH16O75309 829 aa17■□□□□ 0.31
NXF1-216ENST00000533499 MT-ND3P03897 115 aa17■□□□□ 0.31
NXF1-216ENST00000533499 CATP04040 527 aaKnown RBP17■□□□□ 0.31
NXF1-216ENST00000533499 ALDOAP04075 364 aaKnown RBP17■□□□□ 0.31
NXF1-216ENST00000533499 C2P06681 752 aa17■□□□□ 0.31
NXF1-216ENST00000533499 TYRP1P17643 537 aa17■□□□□ 0.31
NXF1-216ENST00000533499 NDUFS1P28331 727 aa17■□□□□ 0.31
NXF1-216ENST00000533499 FASLGP48023 281 aa17■□□□□ 0.31
NXF1-216ENST00000533499 RP1P56715 2156 aa17■□□□□ 0.31
NXF1-216ENST00000533499 SIM1P81133 766 aaPredicted RBP17■□□□□ 0.31
NXF1-216ENST00000533499 IRF9Q00978 393 aa17■□□□□ 0.31
NXF1-216ENST00000533499 CEP85LQ5SZL2 805 aa17■□□□□ 0.31
NXF1-216ENST00000533499 TMEM26Q6ZUK4 368 aa17■□□□□ 0.31
NXF1-216ENST00000533499 NEK10Q6ZWH5 1172 aa17■□□□□ 0.31
NXF1-216ENST00000533499 UBE2R2Q712K3 238 aaPredicted RBP17■□□□□ 0.31
NXF1-216ENST00000533499 C17orf82Q86X59 251 aaPredicted RBP17■□□□□ 0.31
NXF1-216ENST00000533499 OR10G6Q8NH81 332 aa17■□□□□ 0.31
NXF1-216ENST00000533499 BAHD1Q8TBE0 780 aaPredicted RBP17■□□□□ 0.31
NXF1-216ENST00000533499 HNRNPLLQ8WVV9 542 aaKnown RBP17■□□□□ 0.31
NXF1-216ENST00000533499 LCN9Q8WX39 176 aa17■□□□□ 0.31
NXF1-216ENST00000533499 MTBPQ96DY7 904 aa17■□□□□ 0.31
NXF1-216ENST00000533499 TSNARE1Q96NA8 513 aa17■□□□□ 0.31
NXF1-216ENST00000533499 ZIM3Q96PE6 472 aa17■□□□□ 0.31
NXF1-216ENST00000533499 RUFY1Q96T51 708 aa17■□□□□ 0.31
NXF1-216ENST00000533499 CCDC3Q9BQI4 270 aa17■□□□□ 0.31
NXF1-216ENST00000533499 LDHAL6BQ9BYZ2 381 aaPredicted RBP17■□□□□ 0.31
NXF1-216ENST00000533499 XKR8Q9H6D3 395 aa17■□□□□ 0.31
NXF1-216ENST00000533499 SLC40A1Q9NP59 571 aa17■□□□□ 0.31
NXF1-216ENST00000533499 PCMTD2Q9NV79 361 aa17■□□□□ 0.31
NXF1-216ENST00000533499 PCNX2A6NKB5 2137 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 ASXL3Q9C0F0 2248 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 A0A087X1B8 175 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 KRT87PA6NCN2 255 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 FOXO6A8MYZ6 492 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 EIF3FO00303 357 aaPredicted RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 GIPC1O14908 333 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 ZW10O43264 779 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 ZBTB14O43829 449 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 SLC35E2BP0CK96 405 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 AMD1P17707 334 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 CSRP1P21291 193 aaKnown RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 SDHBP21912 280 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 ZKSCAN8Q15776 578 aaPredicted RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 CCSMST1Q4G0I0 132 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 NKAIN2Q5VXU1 208 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 FBXO38Q6PIJ6 1188 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 CYHR1Q6ZMK1 362 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 DCUN1D3Q8IWE4 304 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 TBC1D21Q8IYX1 336 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 OR4E2Q8NGC2 313 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 OR52E1Q8NGJ3 308 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 OR5K2Q8NHB8 316 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 KCTD4Q8WVF5 259 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 EXT2Q93063 718 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 ROPN1BQ9BZX4 212 aaPredicted RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 ROPN1Q9HAT0 212 aaPredicted RBP16.99■□□□□ 0.31
NXF1-216ENST00000533499 POLG2Q9UHN1 485 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 ADAMTS6Q9UKP5 1117 aa16.99■□□□□ 0.31
NXF1-216ENST00000533499 ARHGEF33A8MVX0 844 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 CDC7O00311 574 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 KDM1AO60341 852 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 MATN4O95460 622 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 C1orf105O95561 183 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 TSPAN12O95859 305 aa16.98■□□□□ 0.31
NXF1-216ENST00000533499 MPOP05164 745 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms