RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SLC13A2Q13183 592 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ARSIQ5FYB1 569 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 COX18Q8N8Q8 333 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 NLGN2Q8NFZ4 835 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 OR2AJ1Q8NGZ0 328 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-227ENST00000530748 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 PHF12Q96QT6 1004 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 MGME1Q9BQP7 344 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 ELOVL2Q9NXB9 296 aa8.34□□□□□ -1.07
CTNND1-227ENST00000530748 K7EPI3 171 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 METTL18O95568 372 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ANGPTL1O95841 491 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 IMPDH1P20839 514 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 FSHRP23945 695 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 RFC2P35250 354 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PPP3R1P63098 170 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PPP2R2BQ00005 443 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ECT2LQ008S8 904 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 HERC3Q15034 1050 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 TMEM44Q2T9K0 475 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZZZ3Q8IYH5 903 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GPR65Q8IYL9 337 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 OR10A6Q8NH74 314 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 DCAKDQ8WVC6 231 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SLC13A3Q8WWT9 602 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ARNTL2Q8WYA1 636 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 UFD1Q92890 307 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZBED6CLQ96FA7 236 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GAL3ST4Q96RP7 486 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 DUSP26Q9BV47 211 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 TRPV5Q9NQA5 729 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GRHL1Q9NZI5 618 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 VIRMAQ69YN4 1812 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ATRNL1Q5VV63 1379 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 CAPN8A6NHC0 703 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ARVCFO00192 962 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 NDUFS1P28331 727 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GRK6P43250 576 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 CBX5P45973 191 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ARHGAP1Q07960 439 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 DPY19L1Q2PZI1 675 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 FBXO48Q5FWF7 155 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SIRPB2Q5JXA9 342 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 LRP10Q7Z4F1 713 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 FATE1Q969F0 183 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GTPBP3Q969Y2 492 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 RBM18Q96H35 190 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 NTPCRQ9BSD7 190 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 DPEP2Q9H4A9 486 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 CLEC4AQ9UMR7 237 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 TESMINQ9Y4I5 508 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 FOXO6A8MYZ6 492 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 CA12O43570 354 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PI15O43692 258 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 DHFRP00374 187 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 RENP00797 406 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 RAP2AP10114 183 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PITPNAQ00169 270 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SLC9B1Q4ZJI4 515 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SH3PXD2AQ5TCZ1 1133 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 USP43Q70EL4 1123 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF554Q86TJ5 538 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 AMZ2Q86W34 360 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 NATD1Q8N6N6 113 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 OR4C6Q8NH72 309 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF516Q92618 1163 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 RPL10LQ96L21 214 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZSCAN5AQ9BUG6 496 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 HCN3Q9P1Z3 774 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SALL4Q9UJQ4 1053 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SAGE2PA6NJ88 616 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 WNT9AO14904 365 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GATBO75879 557 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 UGT1A3P35503 534 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 CLCN4P51793 760 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 GPR33Q49SQ1 333 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 KLHL22Q53GT1 634 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ALKBH2Q6NS38 261 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 HID1Q8IV36 788 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZDHHC21Q8IVQ6 265 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF514Q96K75 400 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 MIPEPQ99797 713 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PLEKHA1Q9HB21 404 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 MRM3Q9HC36 420 aaKnown RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 CHMP1AQ9HD42 196 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 IFT46Q9NQC8 304 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 WRAP73Q9P2S5 460 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-227ENST00000530748 UPB1Q9UBR1 384 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 SCML2Q9UQR0 700 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 EDDM13A0A1B0GTR0 161 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 PCDH7O60245 1069 aa8.33□□□□□ -1.08
CTNND1-227ENST00000530748 RSL1D1O76021 490 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms