RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 FOXP4Q8IVH2 680 aaPredicted RBP6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 FAM114A1Q8IWE2 563 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 NANOGP1Q8N7R0 232 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 LPCAT1Q8NF37 534 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 PSMA8Q8TAA3 256 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 DENND1AQ8TEH3 1009 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 SSMEM1Q8WWF3 244 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 WASF1Q92558 559 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 PIGTQ969N2 578 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 CENPTQ96BT3 561 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 EBF3Q9H4W6 596 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 STX8Q9UNK0 236 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 PTGDR2Q9Y5Y4 395 aa6.13□□□□□ -1.43
CAPRIN1-208ENST00000530008 A0A0U1RQJ8 604 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 OR5K3A6NET4 321 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 DUXAA6NLW8 204 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 PPIP5K2O43314 1243 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 SPAG9O60271 1321 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 B3GALNT1O75752 331 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 SERPINI2O75830 405 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 BMP10O95393 424 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 GAP43P17677 238 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 RFX2P48378 723 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 MFAP3P55082 362 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 ABATP80404 500 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 ROR2Q01974 943 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 RUNX1T1Q06455 604 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 DHX34Q14147 1143 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 DNAJC21Q5F1R6 531 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 CCNI2Q6ZMN8 369 aaPredicted RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 RABEPKQ7Z6M1 372 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 RTL3Q8N8U3 475 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 DAZLQ92904 295 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 XPO4Q9C0E2 1151 aaKnown RBP6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 LRMDAQ9H2I8 198 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 DNAJC4Q9NNZ3 241 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 FBXL5Q9UKA1 691 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 APPL1Q9UKG1 709 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 AMDHD2Q9Y303 409 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 PCDHAC2Q9Y5I4 1007 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 INSL5Q9Y5Q6 135 aa6.12□□□□□ -1.43
CAPRIN1-208ENST00000530008 A0A1W2PPW3 197 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 HYKKA2RU49 373 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 C15orf62A8K5M9 175 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 BUD23O43709 281 aaKnown RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 NME6O75414 186 aaPredicted RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 AKAP3O75969 853 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 LUC7L3O95232 432 aaKnown RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 IGHV4-30-4P0DP06 118 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 HOXB2P14652 356 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 CCND3P30281 292 aaPredicted RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 CTNNB1P35222 781 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 HSD17B3P37058 310 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 CD86P42081 329 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 PSMC4P43686 418 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 MMP13P45452 471 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 MTCP1P56278 107 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 IQCCQ4KMZ1 466 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 SYT14P1Q58G82 188 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 EFHC1Q5JVL4 640 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 ZNF626Q68DY1 528 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 KLC3Q6P597 504 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 CATSPER4Q7RTX7 472 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 NRARPQ7Z6K4 114 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 COMMD2Q86X83 199 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 GBGT1Q8N5D6 347 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 OR14A16Q8NHC5 309 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 NCOA7Q8NI08 942 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 VANGL1Q8TAA9 524 aaPredicted RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 ST7LQ8TDW4 575 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 BCL2L2Q92843 193 aaPredicted RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 SNRNP40Q96DI7 357 aaKnown RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 CHFRQ96EP1 664 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 KLHL5Q96PQ7 755 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 PRAM1Q96QH2 718 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 PKP4Q99569 1192 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 SPXQ9BT56 116 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 SRD5A3Q9H8P0 318 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 TMEM161AQ9NX61 479 aa6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 SPIN1Q9Y657 262 aaPredicted RBP6.11□□□□□ -1.43
CAPRIN1-208ENST00000530008 OR6C75A6NL08 312 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 ANKRD66B4E2M5 251 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 TNFRSF13BO14836 293 aaPredicted RBP6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 VEGFDO43915 354 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 BCAS2O75934 225 aaPredicted RBP6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 SMIM18P0DKX4 95 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 PCP11498 1178 aaKnown RBP6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 EPCAMP16422 314 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 HOXD3P31249 432 aaPredicted RBP6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 PTGER4P35408 488 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 GDF5P43026 501 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 GSDMDP57764 484 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 STARD6P59095 220 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 MAT1AQ00266 395 aaKnown RBP6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 PRKAA1Q13131 559 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 SGCBQ16585 318 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 AARDQ4LEZ3 155 aa6.1□□□□□ -1.43
CAPRIN1-208ENST00000530008 CYB5D1Q6P9G0 228 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms