RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ERP27Q96DN0 273 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 KLHDC7BQ96G42 594 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 RILPQ96NA2 401 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 MYLK2Q9H1R3 596 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 KCNH6Q9H252 994 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
TTC39A-216ENST00000530004 COG4Q9H9E3 785 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 DNAJC28Q9NX36 388 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 SUSD2Q9UGT4 822 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 CDYLQ9Y232 598 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 GON4LQ3T8J9 2241 aa14.09□□□□□ -0.15
TTC39A-216ENST00000530004 PIKFYVEQ9Y2I7 2098 aa14.08□□□□□ -0.15
TTC39A-216ENST00000530004 THADAQ6YHU6 1953 aa14.08□□□□□ -0.15
TTC39A-216ENST00000530004 A0A1B0GTW7 788 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 SLCO1B7G3V0H7 640 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 MATN2O00339 956 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 UBFD1O14562 309 aaKnown RBP14.08□□□□□ -0.16
TTC39A-216ENST00000530004 HDAC3O15379 428 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 VEGFDO43915 354 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 DIAPH2O60879 1101 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 GPC4O75487 556 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 UBOX5O94941 541 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 GUCA1CO95843 209 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 MPC1LP0DKB6 136 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 GNSP15586 552 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 ZNF8P17098 575 aaPredicted RBP14.08□□□□□ -0.16
TTC39A-216ENST00000530004 VCLP18206 1134 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
TTC39A-216ENST00000530004 AFF3P51826 1226 aaKnown RBP14.08□□□□□ -0.16
TTC39A-216ENST00000530004 NFATC4Q14934 902 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 PHKG1Q16816 387 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 SLC22A18ASQ8N1D0 253 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 PDPRQ8NCN5 879 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 PIGKQ92643 395 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 LOXL4Q96JB6 756 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 NSUN5Q96P11 429 aaKnown RBP14.08□□□□□ -0.16
TTC39A-216ENST00000530004 C1QTNF3Q9BXJ4 246 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 IRF2BPLQ9H1B7 796 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 VTI1BQ9UEU0 232 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 ZFP69BQ9UJL9 534 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
TTC39A-216ENST00000530004 PRR5-ARHGAP8B1AHC4 643 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 TMEM233B4DJY2 109 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 GRID2O43424 1007 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 SLCO2B1O94956 709 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 HTR1BP28222 390 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 HOXD12P35452 270 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 DPP6P42658 865 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 CSNK1EP49674 416 aaKnown RBP14.07□□□□□ -0.16
TTC39A-216ENST00000530004 THOP1P52888 689 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 CLCQ05315 142 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 SPRED3Q2MJR0 410 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 EPGNQ6UW88 154 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 UBE2R2Q712K3 238 aaPredicted RBP14.07□□□□□ -0.16
TTC39A-216ENST00000530004 LILRA3Q8N6C8 439 aaPredicted RBP14.07□□□□□ -0.16
TTC39A-216ENST00000530004 GBP7Q8N8V2 638 aaPredicted RBP14.07□□□□□ -0.16
TTC39A-216ENST00000530004 MAPK15Q8TD08 544 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 TRPC4APQ8TEL6 797 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 ESAMQ96AP7 390 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 TMEM159Q96B96 161 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 ZNF514Q96K75 400 aaPredicted RBP14.07□□□□□ -0.16
TTC39A-216ENST00000530004 EGFL8Q99944 293 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 RDH14Q9HBH5 336 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 TNFRSF12AQ9NP84 129 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 RAB23Q9ULC3 237 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 TMEM98Q9Y2Y6 226 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 FIS1Q9Y3D6 152 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 SDK1Q7Z5N4 2213 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 WDFY4Q6ZS81 3184 aa14.07□□□□□ -0.16
TTC39A-216ENST00000530004 SPTY2D1-AS1A0A0U1RR47 76 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 SLC5A10A0PJK1 596 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 ANKRD65E5RJM6 399 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 TLR4O00206 839 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 VILLO15195 856 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 C8GP07360 202 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 KELP23276 732 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 PREPP48147 710 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 PTK2BQ14289 1009 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 GALNTL6Q49A17 601 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 SLC9B1Q4ZJI4 515 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 LACTB2Q53H82 288 aaPredicted RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 DOK6Q6PKX4 331 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 CRTC3Q6UUV7 619 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 DCP2Q8IU60 420 aaKnown RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 AFAP1L2Q8N4X5 818 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 ASB11Q8WXH4 323 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 ATOH1Q92858 354 aaPredicted RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 GLMNQ92990 594 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 PPP1R36Q96LQ0 422 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 WDR92Q96MX6 357 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 NUF2Q9BZD4 464 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 SEMA4BQ9NPR2 832 aaPredicted RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 PCTPQ9UKL6 214 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 APOBEC2Q9Y235 224 aaKnown RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 SLC17A4Q9Y2C5 497 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 ASB1Q9Y576 335 aa14.06□□□□□ -0.16
TTC39A-216ENST00000530004 TNPO3Q9Y5L0 923 aaKnown RBP14.06□□□□□ -0.16
TTC39A-216ENST00000530004 FANCMQ8IYD8 2048 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms