RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IGFBP6P24592 240 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 ERVK-8P63133 956 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 ZC3H12BQ5HYM0 836 aaKnown RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 PSAPL1Q6NUJ1 521 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 PGAM4Q8N0Y7 254 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 LIX1Q8N485 282 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 FAM46DQ8NEK8 389 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 DACT3Q96B18 629 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 ZNF317Q96PQ6 595 aaPredicted RBP14.78□□□□□ -0.04
USP47-207ENST00000527733 GSDMCQ9BYG8 508 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 CWH43Q9H720 699 aa14.78□□□□□ -0.04
USP47-207ENST00000527733 SMAD6O43541 496 aaKnown RBP14.77□□□□□ -0.04
USP47-207ENST00000527733 HS6ST1O60243 411 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 ACRV1P26436 265 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 RPL10P27635 214 aaKnown RBP14.77□□□□□ -0.04
USP47-207ENST00000527733 TNK2Q07912 1038 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 HEPACAMQ14CZ8 416 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 PCLAFQ15004 111 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 PTCHD3Q3KNS1 767 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 UTP15Q8TED0 518 aaKnown RBP14.77□□□□□ -0.04
USP47-207ENST00000527733 SEMA6AQ9H2E6 1030 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 MAGEL2Q9UJ55 1249 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 RIMKLBQ9ULI2 386 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 STON1Q9Y6Q2 735 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 ATXN2Q99700 1313 aaKnown RBP14.77□□□□□ -0.04
USP47-207ENST00000527733 ZCWPW2A0A1B0GU75 182 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 DHRS12A0PJE2 317 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 CCDC189A1A4V9 331 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 STX16-NPEPL1H3BU86 382 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 STX16O14662 325 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 CLOCKO15516 846 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 SLBPQ14493 270 aaKnown RBP eCLIP14.77□□□□□ -0.04
USP47-207ENST00000527733 CST6Q15828 149 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 SLC9B1Q4ZJI4 515 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 GPAT3Q53EU6 434 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 IRGCQ6NXR0 463 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 AGTRAPQ6RW13 159 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 GAREM2Q75VX8 874 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 MCMBPQ9BTE3 642 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 YIPF3Q9GZM5 350 aa14.77□□□□□ -0.04
USP47-207ENST00000527733 SMCHD1A6NHR9 2005 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 PDE9AO76083 593 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 SPINT3P49223 89 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 CCR8P51685 355 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 FBXO43Q4G163 708 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 PAOXQ6QHF9 649 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 HEATR4Q86WZ0 1026 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 SLC43A3Q8NBI5 491 aa14.77□□□□□ -0.05
USP47-207ENST00000527733 C9JVG2 144 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 SLC22A2O15244 555 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 SERPINB7O75635 380 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 ARSAP15289 507 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 IFNGR2P38484 337 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 PREPP48147 710 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 PWP1Q13610 501 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 FRG2Q64ET8 278 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 CCSAPQ6IQ19 270 aaPredicted RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 TXNDC5Q8NBS9 432 aaKnown RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 TTLQ8NG68 377 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 ISG20Q96AZ6 181 aaKnown RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 FRG2BQ96QU4 278 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 SLC2A4RGQ9NR83 387 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 CXXC1Q9P0U4 656 aaPredicted RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 CFAP20Q9Y6A4 193 aaKnown RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 KRT36O76013 467 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 GSNP06396 782 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 MAGEA10P43363 369 aaPredicted RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 DHPSP49366 369 aaPredicted RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 PROSER1Q86XN7 944 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 DCUN1D3Q8IWE4 304 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 DHRSXQ8N5I4 330 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 ARMC5Q96C12 935 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 TXLNGYQ9BZA5 131 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 ZNF395Q9H8N7 513 aaPredicted RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 SIRPGQ9P1W8 387 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 A0A1W2PQU0 124 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 NUDT14O95848 222 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 C5AR1P21730 350 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 GDF5P43026 501 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 RFTN2Q52LD8 501 aaPredicted RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 NADSYN1Q6IA69 706 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 IYDQ6PHW0 289 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 EBPLQ9BY08 206 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 SLC29A3Q9BZD2 475 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 PDP2Q9P2J9 529 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 LOXHD1Q8IVV2 1947 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 BDKRB1P46663 353 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 PLA2G16P53816 162 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 IL5RAQ01344 420 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 SRSF11Q05519 484 aaKnown RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 MRPL58Q14197 206 aaKnown RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 AVL9Q8NBF6 648 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 B4GALNT2Q8NHY0 566 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 EXOSC8Q96B26 276 aaKnown RBP14.76□□□□□ -0.05
USP47-207ENST00000527733 ZNF607Q96SK3 696 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 OSBPL7Q9BZF2 842 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 FBRSQ9HAH7 460 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 MKS1Q9NXB0 559 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 ZDHHC2Q9UIJ5 367 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms