RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 RRADP55042 308 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 CSE1LP55060 971 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 DMPKQ09013 629 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 KIF5AQ12840 1032 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ITGA9Q13797 1035 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 SSPNQ14714 243 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 NCF4Q15080 339 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZIC1Q15915 447 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZNF789Q5FWF6 425 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 C1QL3Q5VWW1 255 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 LYPLAL1Q5VWZ2 237 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZNF517Q6ZMY9 492 aaPredicted RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 SHISA6Q6ZSJ9 500 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 TAS2R42Q7RTR8 314 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 CUZD1Q86UP6 607 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 RAB43Q86YS6 212 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 GALNT16Q8N428 558 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZADH2Q8N4Q0 377 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 TAB3Q8N5C8 712 aaPredicted RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 RNF10Q8N5U6 811 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 GLIS1Q8NBF1 620 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 TTC13Q8NBP0 860 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 OR52E1Q8NGJ3 308 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 OR8K5Q8NH50 307 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 CNDP1Q96KN2 507 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 SMAD5Q99717 465 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 FAM118BQ9BPY3 351 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ZCCHC2Q9C0B9 1178 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 ZNF552Q9H707 407 aaPredicted RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 C1GALT1Q9NS00 363 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 P4HTMQ9NXG6 502 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 ACTR10Q9NZ32 417 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 IFT80Q9P2H3 777 aaPredicted RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 NFKBIL1Q9UBC1 381 aaPredicted RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 RSPH14Q9UHP6 348 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 CRLS1Q9UJA2 301 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 POMT2Q9UKY4 750 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 BTRCQ9Y297 605 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 B3GNT3Q9Y2A9 372 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 TDRKHQ9Y2W6 561 aaKnown RBP6.37□□□□□ -1.39
CD44-221ENST00000526000 PCDHGB7Q9Y5F8 929 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 PCDHA13Q9Y5I0 950 aa6.37□□□□□ -1.39
CD44-221ENST00000526000 WIPF3A6NGB9 483 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 SOWAHDA6NJG2 315 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 C2orf81A6NN90 581 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 IFRD1O00458 451 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 SPOPO43791 374 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 KLF7O75840 302 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 OR2B3O76000 313 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 SRP72O76094 671 aaKnown RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 POU3F2P20265 443 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 ITGA3P26006 1051 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 NDUFS1P28331 727 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 RBL1P28749 1068 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 TNFRSF8P28908 595 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 FOLR3P41439 243 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 GRIA3P42263 894 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 SLC1A1P43005 524 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 CCZ1BP86790 482 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 CCZ1P86791 482 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 XIAPP98170 497 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 PRKD1Q15139 912 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 ZRANB3Q5FWF4 1079 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 DCAF10Q5QP82 559 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 VWA5B1Q5TIE3 1220 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 RAD9BQ6WBX8 426 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 UNC5AQ6ZN44 842 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 MRGPREQ86SM8 312 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 KIAA1328Q86T90 577 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 AMIGO1Q86WK6 493 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 PRSS58Q8IYP2 241 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 GPR135Q8IZ08 494 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 ADGRF3Q8IZF5 1079 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 CLDN19Q8N6F1 224 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 METTL27Q8N6F8 245 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 AMER2Q8N7J2 671 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 CLEC1AQ8NC01 280 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 CATSPER1Q8NEC5 780 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 ACVR1CQ8NER5 493 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 DNAJB14Q8TBM8 379 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 ZFPM2Q8WW38 1151 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 TFGQ92734 400 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 P3H4Q92791 437 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 FER1L6-AS2Q96M78 137 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 LRFN5Q96NI6 719 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 PHF12Q96QT6 1004 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 FCRL5Q96RD9 977 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 SRPK1Q96SB4 655 aaKnown RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 FSD1LQ9BXM9 530 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 UNKQ9C0B0 810 aaKnown RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 TRABDQ9H4I3 376 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 LATS2Q9NRM7 1088 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 PIH1D1Q9NWS0 290 aaKnown RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 SPHK1Q9NYA1 384 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 HACD3Q9P035 362 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 STOX2Q9P2F5 926 aaPredicted RBP6.36□□□□□ -1.39
CD44-221ENST00000526000 ITGB1BP2Q9UKP3 347 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 TFR2Q9UP52 801 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms