RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 LMNTD1Q8N9Z9 388 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 ZSCAN1Q8NBB4 408 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 P2RY12Q9H244 342 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 TRIT1Q9H3H1 467 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 PDE7BQ9NP56 450 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 SOHLH2Q9NX45 425 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 CIDEBQ9UHD4 219 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 LNPEPQ9UIQ6 1025 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 POMT2Q9UKY4 750 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 RARRES3Q9UL19 164 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 ICKQ9UPZ9 632 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 CDYLQ9Y232 598 aa12.47□□□□□ -0.41
TRAPPC4-205ENST00000525079 SDR42E2A6NKP2 422 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 ZBTB11O95625 1053 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 APOA4P06727 396 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 PVRP15151 417 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 TCP1P17987 556 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 AOAHP28039 575 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 FMO4P31512 558 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 FNTAP49354 379 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 ACY1Q03154 408 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 MRNIPQ6NTE8 343 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 PWWP2BQ6NUJ5 590 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 C6orf15Q6UXA7 325 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 UNC5AQ6ZN44 842 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 SDCCAG8Q86SQ7 713 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 KMT5CQ86Y97 462 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 KLHL7Q8IXQ5 586 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 ADGRF3Q8IZF5 1079 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 AGGF1Q8N302 714 aaeCLIP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 D2HGDHQ8N465 521 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 NAT8LQ8N9F0 302 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 MCUQ8NE86 351 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 EXTL1Q92935 676 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 ZNF669Q96BR6 464 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 FAM136AQ96C01 138 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 TSSK1BQ9BXA7 367 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 SLC12A9Q9BXP2 914 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 GPN2Q9H9Y4 310 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 FGF21Q9NSA1 209 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 SPHK1Q9NYA1 384 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 ACTR10Q9NZ32 417 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 SAMD15Q9P1V8 674 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 IL17BQ9UHF5 180 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 CRYL1Q9Y2S2 319 aa12.46□□□□□ -0.41
TRAPPC4-205ENST00000525079 AHCTF1Q8WYP5 2266 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 PIPSLA2A3N6 862 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 C2orf74A8MZ97 194 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 NKX2-8O15522 239 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 GPC4O75487 556 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 NTRK1P04629 796 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 MLNP12872 115 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 ST6GAL1P15907 406 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 PLOD1Q02809 727 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 ABHD18Q0P651 414 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 DHX34Q14147 1143 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 ANKRD20A4Q4UJ75 823 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZNF789Q5FWF6 425 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 CTSL3PQ5NE16 218 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 TMTC4Q5T4D3 741 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 PRAMEF17Q5VTA0 474 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 KIAA0930Q6ICG6 404 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 NEPROQ6NW34 567 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 TRIM73Q86UV7 250 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 PPIL6Q8IXY8 311 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 C2orf73Q8N5S3 287 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 ESX1Q8N693 406 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 OR5K2Q8NHB8 316 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 STAMBPL1Q96FJ0 436 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 XAB2Q9HCS7 855 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 C1GALT1Q9NS00 363 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 ASIC3Q9UHC3 531 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 POLG2Q9UHN1 485 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 GNPTGQ9UJJ9 305 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 MRPS18BQ9Y676 258 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 MAD1L1Q9Y6D9 718 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 RPS6KL1Q9Y6S9 549 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
TRAPPC4-205ENST00000525079 MGAQ8IWI9 3026 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 FAM237BA0A1B0GVD1 139 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 MAGEB16A2A368 324 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 MATN2O00339 956 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 NIPSNAP2O75323 286 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 KATNA1O75449 491 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 CHRM5P08912 532 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 PRKAR1AP10644 381 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 UGT2B7P16662 529 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 PAMP19021 973 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 RPS3P23396 243 aaKnown RBP eCLIP12.44□□□□□ -0.422e-8■■■■■ 45.7
TRAPPC4-205ENST00000525079 F8A1P23610 371 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 SHMT2P34897 504 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 STAT5AP42229 794 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms