RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PDE7BQ9NP56 450 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 FGF21Q9NSA1 209 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 OCIAD1Q9NX40 245 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 AGO1Q9UL18 857 aaKnown RBP6.89□□□□□ -1.31
NEDD8-203ENST00000524927 GPR34Q9UPC5 381 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 ITIH6Q6UXX5 1313 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CACNA1CQ13936 2221 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 CNTRLQ7Z7A1 2325 aa6.89□□□□□ -1.31
NEDD8-203ENST00000524927 AQP7P3A6NL99 342 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 TTC34A8MYJ7 566 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 ZW10O43264 779 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 NUDT21O43809 227 aaKnown RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 NCR1O76036 304 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 CLDN14O95500 239 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 SRPRAP08240 638 aaKnown RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 DNASE1P24855 282 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 ACRV1P26436 265 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 CORO1AP31146 461 aaKnown RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 PGFP49763 221 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 COG7P83436 770 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 B4GALNT1Q00973 533 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 CHAF1BQ13112 559 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 RAPGEF1Q13905 1077 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 NPY5RQ15761 445 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 PFKFB4Q16877 469 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 MDH1BQ5I0G3 518 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 B3GNTL1Q67FW5 361 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 HMBOX1Q6NT76 420 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 KCTD20Q7Z5Y7 419 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 CAMKMTQ7Z624 323 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 TMEM200AQ86VY9 491 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 SPARTQ8N0X7 666 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 ZNF557Q8N988 423 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 ATG16L2Q8NAA4 619 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 SIMC1Q8NDZ2 872 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 FDCSPQ8NFU4 85 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 SPAG5Q96R06 1193 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 NUDT22Q9BRQ3 303 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 TMEM121Q9BTD3 319 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 PTDSS2Q9BVG9 487 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 ALOXE3Q9BYJ1 711 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 LRRC2Q9BYS8 371 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 FBXO44Q9H4M3 255 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 OBP2BQ9NPH6 170 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 AKIP1Q9NQ31 210 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 FBXO8Q9NRD0 319 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 LRFN1Q9P244 771 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 LRIT1Q9P2V4 623 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 SNX9Q9Y5X1 595 aa6.88□□□□□ -1.31
NEDD8-203ENST00000524927 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
NEDD8-203ENST00000524927 A0A0U1RQS6 177 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 A0A1W2PS29 197 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ARGFXA6NJG6 315 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 CCL21O00585 134 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 SLC16A4O15374 487 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 TRIAP1O43715 76 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 NDUFA10O95299 355 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ZNF20P17024 532 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 CD70P32970 193 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 SPAM1P38567 509 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 BLKP51451 505 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 SMSP52788 366 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 METAP1P53582 386 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 POU5F1Q01860 360 aaKnown RBP6.87□□□□□ -1.31
NEDD8-203ENST00000524927 CCDC15Q0P6D6 951 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 E2F2Q14209 437 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ZACNQ401N2 412 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 TPRG1LQ5T0D9 272 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 FAXCQ5TGI0 409 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 LYPLAL1Q5VWZ2 237 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 FCRL6Q6DN72 434 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 GALNT17Q6IS24 598 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 IGFL3Q6UXB1 125 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 TADA2BQ86TJ2 420 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 GKN2Q86XP6 184 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ZNF354CQ86Y25 554 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ADGRG5Q8IZF4 528 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 DAW1Q8N136 415 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 NKAPQ8N5F7 415 aaKnown RBP6.87□□□□□ -1.31
NEDD8-203ENST00000524927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEDD8-203ENST00000524927 OR4D9Q8NGE8 314 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 FAR1Q8WVX9 515 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 INPP5DQ92835 1189 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 MYLK2Q9H1R3 596 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEDD8-203ENST00000524927 GPR83Q9NYM4 423 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEDD8-203ENST00000524927 RYR3Q15413 4870 aa6.87□□□□□ -1.31
NEDD8-203ENST00000524927 GAGE12BA1L429 117 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 VWA3AA6NCI4 1184 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 LGALS16A8MUM7 142 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 C1QTNF3-AMACRE9PGA6 284 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 FPGTO14772 594 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 PIP5K1BO14986 540 aa6.86□□□□□ -1.31
NEDD8-203ENST00000524927 MDM4O15151 490 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms