RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 COPS8Q99627 209 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CORO1BQ9BR76 489 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 NTMT1Q9BV86 223 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZBP1Q9H171 429 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 IKZF5Q9H5V7 419 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 VCX3AQ9NNX9 186 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 KCTD5Q9NXV2 234 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TRPS1Q9UHF7 1281 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CD84Q9UIB8 345 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SLCO3A1Q9UIG8 710 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DMTF1Q9Y222 760 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PDE10AQ9Y233 779 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZNF510Q9Y2H8 683 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SEC22BO75396 215 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 STK16O75716 305 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SEC24DO94855 1032 aaPredicted RBP10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LDLRP01130 860 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 C8AP07357 584 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 EBLN1P0CF75 366 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZNF23P17027 643 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MYF6P23409 242 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 HTRA3P83110 453 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CPSF6Q16630 551 aaKnown RBP eCLIP10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TTLL9Q3SXZ7 439 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 USP45Q70EL2 814 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TRIM46Q7Z4K8 759 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TMEM25Q86YD3 366 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 VRK3Q8IV63 474 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MSRB3Q8IXL7 192 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 TRIML2Q8N7C3 387 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CHST14Q8NCH0 376 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 BPIFB1Q8TDL5 484 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CYGBQ8WWM9 190 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 VPS50Q96JG6 964 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CARS2Q9HA77 564 aaKnown RBP10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 HCFC1R1Q9NWW0 138 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PTTG2Q9NZH5 202 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 EIF3LQ9Y262 564 aaKnown RBP10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 HS3ST2Q9Y278 367 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CEPT1Q9Y6K0 416 aa10.53□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SLC28A1O00337 649 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CSF2RAP15509 400 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 GNPDA1P46926 289 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RPIAP49247 311 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 IMPG1Q17R60 797 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 RIMKLAQ8IXN7 391 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 OFCC1Q8IZS5 231 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ZNF786Q8N393 782 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 FAM86B1Q8N7N1 296 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 USP7Q93009 1102 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 SH3GL3Q99963 347 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 HAUS8Q9BT25 410 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 DPY30Q9C005 99 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 CLK4Q9HAZ1 481 aaKnown RBP10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 LRTM1Q9HBL6 345 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ARL15Q9NXU5 204 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 B4GALT6Q9UBX8 382 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 MAGEL2Q9UJ55 1249 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 PPIL1Q9Y3C6 166 aa10.52□□□□□ -0.72
RAB11FIP1-204ENST00000522774 ABHD14A-ACY1A0A1B0GW23 586 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KANSL1LA0AUZ9 987 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 IFRD1O00458 451 aaPredicted RBP10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 AREL1O15033 823 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CCL16O15467 120 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MTX2O75431 263 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 FGF18O76093 207 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 KCNH1O95259 989 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ANXA5P08758 320 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ACRP10323 421 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PCNAP12004 261 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CDH1P12830 882 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PCSK6P29122 969 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ALDH3B2P48448 385 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 HSPA14Q0VDF9 509 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GTDC1Q4AE62 458 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PRR23BQ6ZRT6 265 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 Q6ZVU0 165 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 CHCHD4Q8N4Q1 142 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 MAGEE2Q8TD90 523 aaPredicted RBP10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ZBTB18Q99592 522 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ACPTQ9BZG2 426 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NTN4Q9HB63 628 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC6A13Q9NSD5 602 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SLC25A37Q9NYZ2 338 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 WDR47O94967 919 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SNAP29O95721 258 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 PDYNP01213 254 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 GGT1P19440 569 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 NFKBIAP25963 317 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 ADRM1Q16186 407 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 TMEM214Q6NUQ4 689 aaKnown RBP10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 LILRA6Q6PI73 481 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 SERPINA13PQ6UXR4 307 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 B3GNT6Q6ZMB0 384 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 UBE2R2Q712K3 238 aaPredicted RBP10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OR8J3Q8NGG0 315 aa10.52□□□□□ -0.73
RAB11FIP1-204ENST00000522774 OR10A6Q8NH74 314 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms