RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 DNAJC14Q6Y2X3 702 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TMC3Q7Z5M5 1100 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 OOSP2Q86WS3 158 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 RELL1Q8IUW5 271 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PGBD5Q8N414 524 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 AOPEPQ8N6M6 819 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CLEC1AQ8NC01 280 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CCNYQ8ND76 341 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PIH1D2Q8WWB5 315 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CPT1BQ92523 772 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 RSC1A1Q92681 617 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CLIP3Q96DZ5 547 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF514Q96K75 400 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 FCRL4Q96PJ5 515 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CSPG4P5Q96PW8 444 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PEBP4Q96S96 227 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CD180Q99467 661 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PLCD4Q9BRC7 762 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TIMM29Q9BSF4 260 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TDRD1Q9BXT4 1180 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TRIM55Q9BYV6 548 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 GPR63Q9BZJ6 419 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CNTD2Q9H8S5 307 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 ARFGAP3Q9NP61 516 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 RBM22Q9NW64 420 aaKnown RBP eCLIP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 IRAK4Q9NWZ3 460 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CHMP5Q9NZZ3 219 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CWC15Q9P013 229 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TRIM10Q9UDY6 481 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 AMACRQ9UHK6 382 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TCFL5Q9UL49 500 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 SRPK3Q9UPE1 567 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 FARSAQ9Y285 508 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 SIK3Q9Y2K2 1263 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PPIL1Q9Y3C6 166 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 A0A0U1RQS6 177 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 SSU72P8A0A1W2PR75 194 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 ANKUB1A6NFN9 424 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 OR52A4PA6NMU1 304 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PEX12O00623 359 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 EPHB6O15197 1021 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 VEGFDO43915 354 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 MFSD11O43934 449 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 MAFKO60675 156 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 IPO13O94829 963 aaKnown RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 SORBS2O94875 1100 aaKnown RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TMEM63AO94886 807 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 IGHEP01854 428 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 UQCRHP07919 91 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PDHA1P08559 390 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF8P17098 575 aaPredicted RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 AGXTP21549 392 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 ELAVL4P26378 380 aaKnown RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PBLDP30039 288 aaPredicted RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 AKT1P31749 480 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PCK1P35558 622 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 DCTP40126 519 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 CLCNKAP51800 687 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 VAV2P52735 878 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TUBB4BP68371 445 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 HSD11B2P80365 405 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 MYL5Q02045 173 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 OGDHQ02218 1023 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 DSC2Q02487 901 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 KLHL30Q0D2K2 578 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 MRPL49Q13405 166 aaKnown RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 XRCC4Q13426 336 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 RAPSNQ13702 412 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TUBB2AQ13885 445 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 GPR18Q14330 331 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PIGHQ14442 188 aaPredicted RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 FILIP1LQ4L180 1135 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 VWA5B1Q5TIE3 1220 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PLEKHA7Q6IQ23 1121 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 JMJD6Q6NYC1 403 aaPredicted RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 SASS6Q6UVJ0 657 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 RFLNAQ6ZTI6 216 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 CEP128Q6ZU80 1094 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 MED25Q71SY5 747 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 POLNQ7Z5Q5 900 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 KMT5CQ86Y97 462 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 MAP7D3Q8IWC1 876 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 SLC34A3Q8N130 599 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 GOLM1Q8NBJ4 401 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 OR8K5Q8NH50 307 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TEKT4Q8WW24 435 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 GLYATL1Q969I3 302 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PNPLA2Q96AD5 504 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 PLEKHG4BQ96PX9 1271 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 AGAP2Q99490 1192 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 C17orf62Q9BQA9 187 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TUBB2BQ9BVA1 445 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 SPRY4Q9C004 299 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 AGPAT4Q9NRZ5 378 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 FGF21Q9NSA1 209 aa6.09□□□□□ -1.43
PABPC1-220ENST00000522658 IMP3Q9NV31 184 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms