RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NAB2Q15742 525 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 TPD52L1Q16890 204 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF284Q2VY69 593 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 GLRA4Q5JXX5 417 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ATG9BQ674R7 924 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 JADE1Q6IE81 842 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CCDC70Q6NSX1 233 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 DCLRE1AQ6PJP8 1040 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 INTS8Q75QN2 995 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 WDR49Q8IV35 697 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 FAM114A1Q8IWE2 563 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SLC39A11Q8N1S5 342 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 COLGALT1Q8NBJ5 622 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ZMIZ2Q8NF64 920 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 BEST2Q8NFU1 509 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CSGALNACT1Q8TDX6 532 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 C18orf25Q96B23 403 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM18Q96B42 140 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CCDC127Q96BQ5 260 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 KTI12Q96EK9 354 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SAAL1Q96ER3 474 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 UBXN10Q96LJ8 280 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ZMAT2Q96NC0 199 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF558Q96NG5 402 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 PPP1R10Q96QC0 940 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 TGS1Q96RS0 853 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 FNBP1Q96RU3 617 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 BPIFA3Q9BQP9 254 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SLC25A33Q9BSK2 321 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ANP32EQ9BTT0 268 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 NAT10Q9H0A0 1025 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CXCL16Q9H2A7 254 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 THAP9Q9H5L6 903 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CWH43Q9H720 699 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CHODLQ9H9P2 273 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SLC28A3Q9HAS3 691 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 PLEKHA2Q9HB19 425 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 DPP3Q9NY33 737 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 RRN3Q9NYV6 651 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SPG21Q9NZD8 308 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ARMCX3Q9UH62 379 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 UBQLN1Q9UMX0 589 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 TRIP12Q14669 1992 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 A0A1B0GVM2 712 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CASTOR2A6NHX0 329 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 LRRIQ3A6PVS8 624 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SMTNL1A8MU46 457 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 KDM4EB2RXH2 506 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 FAM157AC9JC47 383 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C5orf67F2Z3F1 127 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM189-UBE2V1I3L0A0 370 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PIRO00625 290 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SLC16A5O15375 505 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 STX10O60499 249 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TSPAN3O60637 253 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 LDB3O75112 727 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TADA2AO75478 443 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 B3GAT3O94766 335 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CLDN7O95471 211 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TNNC2P02585 160 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PYGLP06737 847 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 DLATP10515 647 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TNNI1P19237 187 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C21orf33P30042 268 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 OR1G1P47890 313 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 GCLMP48507 274 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SLC11A1P49279 550 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 COMPP49747 757 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PEX5P50542 639 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TUBA1BP68363 451 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TFAMQ00059 246 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 MYL5Q02045 173 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 UBE3AQ05086 875 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 ELAVL2Q12926 359 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 BFSP1Q12934 665 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 BYSLQ13895 437 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 EFR3AQ14156 821 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 UPP1Q16831 310 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CCDC40Q4G0X9 1142 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 EPC2Q52LR7 807 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C1orf220Q5T0J3 134 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SPOUT1Q5T280 376 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C9orf57Q5W0N0 161 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PRSS57Q6UWY2 283 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CD300LGQ6UXG3 332 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C15orf39Q6ZRI6 1047 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 MMS22LQ6ZRQ5 1243 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C11orf57Q6ZUT1 292 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 C16orf82Q7Z2V1 217 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 NR2C2APQ86WQ0 139 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 DHX40Q8IX18 779 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 EFCAB13Q8IY85 973 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 LRRC52Q8N7C0 313 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 OR5B17Q8NGF7 314 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CEP70Q8NHQ1 597 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 DNASE2BQ8WZ79 361 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SLC35C1Q96A29 364 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SH3KBP1Q96B97 665 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 OTULINQ96BN8 352 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms