RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 NSMCE4AQ9NXX6 385 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 MIS18AQ9NYP9 233 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 RALYQ9UKM9 306 aaKnown RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 PCDHGB4Q9UN71 923 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 OR2W1Q9Y3N9 320 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 PCDHAC2Q9Y5I4 1007 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 TNRC6CQ9HCJ0 1690 aaKnown RBP3.54□□□□□ -1.84
HDAC2-208ENST00000520746 PCNTO95613 3336 aa3.54□□□□□ -1.84
HDAC2-208ENST00000520746 TOGARAM1Q9Y4F4 1720 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 LRRC72A6NJI9 287 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 PRAC2D3DTV9 90 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 TULP2O00295 520 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 CTDSP2O14595 271 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 TMCC2O75069 709 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 F7P08709 466 aaPredicted RBP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 HLA-DOBP13765 273 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 POLR2CP19387 275 aaPredicted RBP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 EIF2S2P20042 333 aaKnown RBP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 PRKAR2BP31323 418 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 USP8P40818 1118 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 SLC15A1P46059 708 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 CD81P60033 236 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 MRPS5P82675 430 aaKnown RBP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 PPP2R2BQ00005 443 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 AIMP1Q12904 312 aaKnown RBP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 EPS8Q12929 822 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 GTF2H2Q13888 395 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 KCNC3Q14003 757 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 TAF7Q15545 349 aaPredicted RBP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 DLG2Q15700 870 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 GTF2H2CQ6P1K8 395 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 PCGF5Q86SE9 256 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 EPHX4Q8IUS5 362 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.53□□□□□ -1.84
HDAC2-208ENST00000520746 SLC38A5Q8WUX1 472 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 SORCS1Q8WY21 1168 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 JAKMIP2Q96AA8 810 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 TTC14Q96N46 770 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 LRMDAQ9H2I8 198 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 RAD21L1Q9H4I0 556 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 DNAJC18Q9H819 358 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 EBF2Q9HAK2 575 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 RNF186Q9NXI6 227 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 B3GALT5Q9Y2C3 310 aa3.53□□□□□ -1.84
HDAC2-208ENST00000520746 J3QR06 171 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 K7ENM7 598 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 BMPR1BO00238 502 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ZNHIT1O43257 154 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ZBTB43O43298 467 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 AHCYL1O43865 530 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 MITFO75030 526 aaPredicted RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 BBOX1O75936 387 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 TUBBP07437 444 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 HRH2P25021 359 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ACSL1P33121 698 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 NRIP1P48552 1158 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 MMP14P50281 582 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SUOXP51687 545 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 FUT6P51993 359 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ZNF132P52740 706 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 PLIN5Q00G26 463 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SPOCK1Q08629 439 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ILF3Q12906 894 aaKnown RBP eCLIP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ZNF234Q14588 700 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 MEP1AQ16819 746 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SYT16Q17RD7 645 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SUSD4Q5VX71 490 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 TMED8Q6PL24 325 aaPredicted RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 RAD9BQ6WBX8 426 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ASB18Q6ZVZ8 466 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ATG9AQ7Z3C6 839 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 EXOC3L1Q86VI1 746 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 PM20D2Q8IYS1 436 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SLC5A8Q8N695 610 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 POC5Q8NA72 575 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 POC1AQ8NBT0 407 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SLC38A9Q8NBW4 561 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 LNX1Q8TBB1 728 aaPredicted RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 CD101Q93033 1021 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 CCDC34Q96HJ3 373 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 RSRC1Q96IZ7 334 aaKnown RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 DDOQ99489 341 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 UTP14AQ9BVJ6 771 aaKnown RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 EVA1AQ9H8M9 152 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ARHGEF38Q9NXL2 777 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 DONSONQ9NYP3 566 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 SEC63Q9UGP8 760 aaKnown RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 TRMT112Q9UI30 125 aaKnown RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 EXO1Q9UQ84 846 aaKnown RBP3.52□□□□□ -1.85
HDAC2-208ENST00000520746 TMEM5Q9Y2B1 443 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 ATP6V0A2Q9Y487 856 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 PKD1L3Q7Z443 1732 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 NCAPD2Q15021 1401 aa3.52□□□□□ -1.85
HDAC2-208ENST00000520746 NPC1L1Q9UHC9 1359 aa3.51□□□□□ -1.85
HDAC2-208ENST00000520746 MAP2P11137 1827 aaKnown RBP3.51□□□□□ -1.85
HDAC2-208ENST00000520746 A0A1W2PP11 408 aa3.51□□□□□ -1.85
HDAC2-208ENST00000520746 OR2A25A4D2G3 310 aa3.51□□□□□ -1.85
HDAC2-208ENST00000520746 ASPDHA6ND91 283 aa3.51□□□□□ -1.85
HDAC2-208ENST00000520746 TMEM8BA6NDV4 472 aa3.51□□□□□ -1.85
HDAC2-208ENST00000520746 ERI2A8K979 691 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms