RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GTF2H2CQ6P1K8 395 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMEM219Q86XT9 240 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 PTOV1Q86YD1 416 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 TUSC5Q8IXB3 177 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 CPSF7Q8N684 471 aaKnown RBP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 L3MBTL4Q8NA19 623 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 CTCFLQ8NI51 663 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 SSMEM1Q8WWF3 244 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 ASB5Q8WWX0 329 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 RAD54LQ92698 747 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 MIB2Q96AX9 1013 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 DHX58Q96C10 678 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 PARK7Q99497 189 aaKnown RBP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 C1QTNF7Q9BXJ2 289 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 DBNDD1Q9H9R9 158 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 CDH20Q9HBT6 801 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 COQ3Q9NZJ6 369 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 ITGA11Q9UKX5 1188 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 VDAC3Q9Y277 283 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 OR2W1Q9Y3N9 320 aa5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 SPIN1Q9Y657 262 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P46-201ENST00000520062 BICDL2A1A5D9 508 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 HYKKA2RU49 373 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 LRRD1A4D1F6 860 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 FAM86B1E9PN63 330 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SLC33A1O00400 549 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF263O14978 683 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 PDE9AO76083 593 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 WDPCPO95876 746 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 FAM86B2P0C5J1 330 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 EPCAMP16422 314 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 TKTP29401 623 aaKnown RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 CCKBRP32239 447 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 AHRP35869 848 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 PSMC4P43686 418 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 TPD52P55327 224 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SEC61A1P61619 476 aaKnown RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 MAT1AQ00266 395 aaKnown RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SLC20A2Q08357 652 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 DLG1Q12959 904 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 PPP2R5CQ13362 524 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ITGA7Q13683 1181 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 C2orf76Q3KRA6 126 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 MDH1BQ5I0G3 518 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 TCTE1Q5JU00 501 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 TXNRD3NBQ6F5E7 133 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF449Q6P9G9 518 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 PACS1Q6VY07 963 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF517Q6ZMY9 492 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 GBP6Q6ZN66 633 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMPRSS11BQ86T26 416 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 COMMD2Q86X83 199 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 KMT5CQ86Y97 462 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 GPALPP1Q8IXQ4 340 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SYCP3Q8IZU3 236 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 PELI3Q8N2H9 469 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 CHCHD4Q8N4Q1 142 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SPC24Q8NBT2 197 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 CCDC107Q8WV48 283 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 HEXDCQ8WVB3 486 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 NSMAFQ92636 917 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SYN2Q92777 582 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ABHD8Q96I13 439 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 SPATA33Q96N06 139 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 MRPL44Q9H9J2 332 aaKnown RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 UBTD1Q9HAC8 227 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 LMAN1LQ9HAT1 526 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 Q9N2K0 584 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 TUFT1Q9NNX1 390 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ACKR4Q9NPB9 350 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 VPS18Q9P253 973 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 WNT16Q9UBV4 365 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 RNF150Q9ULK6 438 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 KNSTRNQ9Y448 316 aa5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 COL3A1P02461 1466 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF521Q96K83 1311 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 A0A0G2JNG1 304 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 A0A0U1RQG5 324 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 FAM90A10PA6NDY2 464 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 YDJCA8MPS7 323 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 RNASEH1O60930 286 aaKnown RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 OAZ2O95190 189 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 LUC7L3O95232 432 aaKnown RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ACSL3O95573 720 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 TCF4P15884 667 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF12P17014 697 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 WNT5AP41221 380 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ARCN1P48444 511 aaKnown RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 STX1BP61266 288 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ISL1P61371 349 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 TUBA1BP68363 451 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ASIC1P78348 528 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 EEF1A2Q05639 463 aaKnown RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 KIR2DS5Q14953 304 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 SYT14P1Q58G82 188 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 OR7E24Q6IFN5 339 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 PLXDC2Q6UX71 529 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 C1QL2Q7Z5L3 287 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms