RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GLT1D1Q96MS3 346 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FAM193BQ96PV7 902 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 CGREF1Q99674 301 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SH3GL1Q99961 368 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TTPALQ9BTX7 342 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CINPQ9BW66 212 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 P2RY12Q9H244 342 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CCSER2Q9H7U1 834 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 MID1IP1Q9NPA3 183 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ACSS2Q9NR19 701 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HEBP1Q9NRV9 189 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 AGPAT4Q9NRZ5 378 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PNPLA3Q9NST1 481 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 DUS2Q9NX74 493 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 CMTM6Q9NX76 183 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ASIC5Q9NY37 505 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ADA2Q9NZK5 511 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CCDC167Q9P0B6 97 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 KLHL42Q9P2K6 505 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SRRDQ9UH36 339 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 AFF4Q9UHB7 1163 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 POLG2Q9UHN1 485 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ZNF225Q9UK10 706 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PACSIN3Q9UKS6 424 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 IKZF3Q9UKT9 509 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CNOT6Q9ULM6 557 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 MAFFQ9ULX9 164 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 G3BP2Q9UN86 482 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 CYP8B1Q9UNU6 501 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 DMTF1Q9Y222 760 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PRG3Q9Y2Y8 225 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 SH3GLB1Q9Y371 365 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 RNF11Q9Y3C5 154 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ZNF711Q9Y462 761 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PCDHB1Q9Y5F3 818 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SPO11Q9Y5K1 396 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 OR51B4Q9Y5P0 310 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ARL5AQ9Y689 179 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 LTBP2Q14767 1821 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ANKRD12Q6UB98 2062 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PIKFYVEQ9Y2I7 2098 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TRBV5-4A0A0C4DH59 114 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 A0A0D9SEW6 157 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 A0A1W2PQ45 241 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 A0A1W2PQY0 241 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FAM234BA2RU67 622 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ASPDHA6ND91 283 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ANKRD66B4E2M5 251 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 H3BNH8 94 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ZNF701M0R085 212 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 EIF3FO00303 357 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 E2F3O00716 465 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 DLGAP1O14490 977 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 VILLO15195 856 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HTRA2O43464 458 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 GREM1O60565 184 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NBNO60934 754 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 VPS26AO75436 327 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NDUFS3O75489 264 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 GJB3O75712 270 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 STC2O76061 302 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ABLIM3O94929 683 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 WDR47O94967 919 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PRSS23O95084 383 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 SIX3O95343 332 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 BMP10O95393 424 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PARNO95453 639 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 H6PDO95479 791 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 STAMBPO95630 424 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 OLFM2O95897 454 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CD160O95971 181 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CLPTM1O96005 669 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 GLUD1P00367 558 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CYBBP04839 570 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 RHOCP08134 193 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ENO2P09104 434 aaPredicted RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 HOXB6P17509 224 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 PSMC3P17980 439 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 NAT1P18440 290 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HDCP19113 662 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 MSH3P20585 1137 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ATP6V1B2P21281 511 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 MYF6P23409 242 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HTR1EP28566 365 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 EEF1DP29692 281 aaKnown RBP4.97□□□□□ -1.61
SDC2-204ENST00000519914 RGRP47804 291 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ERFP50548 548 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 KCNQ1P51787 676 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 HK3P52790 923 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 PLK1P53350 603 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 FOXA1P55317 472 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ERVFC1P60507 584 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 AP1S1P61966 158 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ERVK-8P63133 956 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 ARF5P84085 180 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 CAP1Q01518 475 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 EMX2Q04743 252 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 GALNT3Q14435 633 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 GRB7Q14451 532 aa4.97□□□□□ -1.61
SDC2-204ENST00000519914 TSNQ15631 228 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms