RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 FAM20CQ8IXL6 584 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SLC22A15Q8IZD6 547 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 CFAP61Q8NHU2 1237 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SLC41A2Q96JW4 573 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 CCNL2Q96S94 520 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 KRT12Q99456 494 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 TTC1Q99614 292 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SLC30A3Q99726 388 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 B3GNT4Q9C0J1 378 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SRMSQ9H3Y6 488 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 MVB12BQ9H7P6 319 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SLC17A6Q9P2U8 582 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 PILRAQ9UKJ1 303 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 POMT2Q9UKY4 750 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 TDRKHQ9Y2W6 561 aaKnown RBP12.92□□□□□ -0.34
VEGFA-219ENST00000518824 NFS1Q9Y697 457 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 MAD1L1Q9Y6D9 718 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 MGAQ8IWI9 3026 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 FAM208BQ5VWN6 2430 aa12.92□□□□□ -0.34
VEGFA-219ENST00000518824 SPTBP11277 2137 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 GSAPA4D1B5 854 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 TLCD2A6NGC4 264 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 SLC9B1P1A6NJY1 282 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 K7ENP7 123 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 POLR1CO15160 346 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 TOX3O15405 576 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 RAD1O60671 282 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 STK17BO94768 372 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 SLCO2B1O94956 709 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 ST6GAL1P15907 406 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 PRDX3P30048 256 aaKnown RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 TMPRSS3P57727 454 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 RAB15P59190 212 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 CYP4F2P78329 520 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 MPP1Q00013 466 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 DR1Q01658 176 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 VAC14Q08AM6 782 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 GRB7Q14451 532 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 GPR19Q15760 415 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 CCSMST1Q4G0I0 132 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 SOWAHCQ53LP3 525 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 PRAMEF17Q5VTA0 474 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 BROXQ5VW32 411 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 ZNF470Q6ECI4 717 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 ZNF549Q6P9A3 640 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 KLHL35Q6PF15 583 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 GPR155Q7Z3F1 870 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 AMIGO1Q86WK6 493 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 CILP2Q8IUL8 1156 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 C2orf73Q8N5S3 287 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 FLVCR1-AS1Q8TAF5 88 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 IL17FQ96PD4 163 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 MENTQ9BUN1 341 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 TFB2MQ9H5Q4 396 aaKnown RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 AKIRIN1Q9H9L7 192 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-219ENST00000518824 SAMD15Q9P1V8 674 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 GNPTGQ9UJJ9 305 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 MED16Q9Y2X0 877 aa12.91□□□□□ -0.34
VEGFA-219ENST00000518824 IGSF10Q6WRI0 2623 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 LOC101059948A0A1B0GTJ6 334 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 STMND1H3BQB6 276 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 HCRTR1O43613 425 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 USP1O94782 785 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 DLGAP3O95886 979 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 LIFP15018 202 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
VEGFA-219ENST00000518824 CD82P27701 267 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 PPARGP37231 505 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-219ENST00000518824 SLC1A2P43004 574 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 BDKRB1P46663 353 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 ITGA8P53708 1063 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 BBS9Q3SYG4 887 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 MANEAQ5SRI9 462 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 MRNIPQ6NTE8 343 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 CNSTQ6PJW8 725 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 CEACAM20Q6UY09 585 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 CCDC81Q6ZN84 652 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 TBC1D21Q8IYX1 336 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 SIDT2Q8NBJ9 832 aaKnown RBP12.9□□□□□ -0.34
VEGFA-219ENST00000518824 OR5K2Q8NHB8 316 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 GIMAP7Q8NHV1 300 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 UBXN4Q92575 508 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 STAMBPL1Q96FJ0 436 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 ASPSCR1Q9BZE9 553 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 TRIT1Q9H3H1 467 aaKnown RBP12.9□□□□□ -0.34
VEGFA-219ENST00000518824 C20orf96Q9NUD7 363 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-219ENST00000518824 ACTR10Q9NZ32 417 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 TMEM184BQ9Y519 407 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-219ENST00000518824 FAM169AQ9Y6X4 670 aa12.9□□□□□ -0.34
VEGFA-219ENST00000518824 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
VEGFA-219ENST00000518824 MAGEB16A2A368 324 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms