RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 LRCH3Q96II8 777 aa25.95■■□□□ 1.75
COL13A1-210ENST00000517713 PPP3R2Q96LZ3 170 aa25.95■■□□□ 1.75
COL13A1-210ENST00000517713 IL1RL2Q9HB29 575 aa25.95■■□□□ 1.75
COL13A1-210ENST00000517713 CCL27Q9Y4X3 112 aa25.95■■□□□ 1.75
COL13A1-210ENST00000517713 TCF20Q9UGU0 1960 aaKnown RBP25.95■■□□□ 1.75
COL13A1-210ENST00000517713 COL4A3Q01955 1670 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 TMEM202A6NGA9 273 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 SLC28A1O00337 649 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 PLK4O00444 970 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 AREL1O15033 823 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 RGS14O43566 566 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 TSPAN6O43657 245 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 ULK1O75385 1050 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 CLDN9O95484 217 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 POLR2JP52435 117 aaKnown RBP25.95■■□□□ 1.74
COL13A1-210ENST00000517713 SLC7A2P52569 658 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 ATXN3P54252 364 aaPredicted RBP25.95■■□□□ 1.74
COL13A1-210ENST00000517713 AP1S2P56377 157 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 ZXDCQ2QGD7 858 aaPredicted RBP25.95■■□□□ 1.74
COL13A1-210ENST00000517713 ZFP1Q6P2D0 407 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 PRMT9Q6P2P2 845 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 MINDY1Q8N5J2 469 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 SUSD6Q92537 303 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 FAM8A1Q9UBU6 413 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 TRANK1O15050 2925 aa25.95■■□□□ 1.74
COL13A1-210ENST00000517713 RFXAPO00287 272 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 EPORP19235 508 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 GJA4P35212 333 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 PRLHRP49683 370 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 MRPS22P82650 360 aaKnown RBP25.94■■□□□ 1.74
COL13A1-210ENST00000517713 GRM2Q14416 872 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 SYTL3Q4VX76 610 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 SYCE2Q6PIF2 218 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 KBTBD2Q8IY47 623 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 YAF2Q8IY57 180 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 CCM2Q9BSQ5 444 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 SLC29A3Q9BZD2 475 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 PLA2G2FQ9BZM2 168 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 DYRK4Q9NR20 520 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 FARSBQ9NSD9 589 aaKnown RBP25.94■■□□□ 1.74
COL13A1-210ENST00000517713 EPS15L1Q9UBC2 864 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 PSMD13Q9UNM6 376 aa25.94■■□□□ 1.74
COL13A1-210ENST00000517713 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 FAM234BA2RU67 622 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 LINC01565O15544 149 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 SLC6A12P48065 614 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 TRAP1Q12931 704 aaKnown RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 TMEM184AQ6ZMB5 413 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 RASGRP3Q8IV61 690 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 PROKR1Q8TCW9 393 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 VPS33AQ96AX1 596 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 ZNF184Q99676 751 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 ACTR8Q9H981 624 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 SLC28A3Q9HAS3 691 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 ZNF490Q9ULM2 529 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 CCDC154A6NI56 674 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 MANBAO00462 879 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 RECQL5O94762 991 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 IL12RB1P42701 662 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 PTCHD3Q3KNS1 767 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 RFTN2Q52LD8 501 aaPredicted RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 IL23RQ5VWK5 629 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 TMEM220Q6QAJ8 160 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 TRIM46Q7Z4K8 759 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 MMAAQ8IVH4 418 aaKnown RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 TMEM159Q96B96 161 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 MRPL38Q96DV4 380 aaKnown RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 NUS1Q96E22 293 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 PCDHAC1Q9H158 963 aa25.93■■□□□ 1.74
COL13A1-210ENST00000517713 CNOT6Q9ULM6 557 aaKnown RBP25.93■■□□□ 1.74
COL13A1-210ENST00000517713 GSTM1P09488 218 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 G6PDP11413 515 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 IL12AP29459 219 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 GSTM4Q03013 218 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ABRQ12979 859 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 MAP7D1Q3KQU3 841 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ANKRD54Q6NXT1 300 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ZNF765Q7L2R6 523 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 LRRC58Q96CX6 371 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 THAP10Q9P2Z0 257 aaPredicted RBP25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ASPDHA6ND91 283 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 FXYD1O00168 92 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 MMP20O60882 483 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 EEDO75530 441 aaKnown RBP25.92■■□□□ 1.74
COL13A1-210ENST00000517713 SOD1P00441 154 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 C6P13671 934 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 SLC2A4P14672 509 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 SGO1Q5FBB7 561 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 CYP20A1Q6UW02 462 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ERN2Q76MJ5 926 aaKnown RBP25.92■■□□□ 1.74
COL13A1-210ENST00000517713 DSG4Q86SJ6 1040 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 NLRP8Q86W28 1048 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 SPATA24Q86W54 205 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 GLMNQ92990 594 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 USP7Q93009 1102 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ZDHHC4Q9NPG8 344 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ABCD2Q9UBJ2 740 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 ZNHIT2Q9UHR6 403 aa25.92■■□□□ 1.74
COL13A1-210ENST00000517713 POLR3HQ9Y535 204 aaPredicted RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms