RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 TMEM259Q4ZIN3 620 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 RAET1GQ6H3X3 334 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TRMT11Q7Z4G4 463 aaKnown RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TRIM46Q7Z4K8 759 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 C11orf96Q7Z7L8 435 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TRIM74Q86UV6 250 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SNX32Q86XE0 403 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FUNDC1Q8IVP5 155 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SCUBE1Q8IWY4 988 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ULK2Q8IYT8 1036 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DSELQ8IZU8 1212 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ARHGAP24Q8N264 748 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PLCD3Q8N3E9 789 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SFRP1Q8N474 314 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HDDC3Q8N4P3 179 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 LILRA3Q8N6C8 439 aaPredicted RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CDYL2Q8N8U2 506 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 L3MBTL4Q8NA19 623 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TP53I13Q8NBR0 393 aaPredicted RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PLA2G15Q8NCC3 412 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OR4F6Q8NGB9 312 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OR2T11Q8NH01 316 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OR2L2Q8NH16 312 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 METTL6Q8TCB7 284 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MAGEC3Q8TD91 643 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TSPEARQ8WU66 669 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DNASE1L2Q92874 299 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MCUR1Q96AQ8 359 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TMEM159Q96B96 161 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ERLEC1Q96DZ1 483 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HIST1H2AHQ96KK5 128 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MARK4Q96L34 752 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CDK15Q96Q40 435 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HIST1H2AJQ99878 128 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 EGFL8Q99944 293 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 H2AFJQ9BTM1 129 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 THTPAQ9BU02 230 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TEX101Q9BY14 249 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 BRINP2Q9C0B6 783 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ZCCHC2Q9C0B9 1178 aaKnown RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OR2AG1Q9H205 316 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DPEP2Q9H4A9 486 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 DENND2DQ9H6A0 471 aaPredicted RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 EFCAB1Q9HAE3 211 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SLC52A3Q9NQ40 469 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PFDN4Q9NQP4 134 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SDR39U1Q9NRG7 319 aaPredicted RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TMEM45AQ9NWC5 275 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FBXL12Q9NXK8 326 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 WWOXQ9NZC7 414 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 OPTCQ9UBM4 332 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 LIMD1Q9UGP4 676 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SCML1Q9UN30 329 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 G3BP2Q9UN86 482 aaKnown RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 BTRCQ9Y297 605 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CCL27Q9Y4X3 112 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 GPR45Q9Y5Y3 372 aa5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 TDRD6O60522 2096 aaKnown RBP5.3□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MEI4A8MW99 385 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 C10orf142B7Z368 130 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 GPR89AB7ZAQ6 455 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 NPIPB8E9PQR5 432 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 H3BM21 787 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 H3BQ06 376 aaPredicted RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MANBAO00462 879 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FBP2O00757 339 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 AIM2O14862 343 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 LSM1O15116 133 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 MBTPS2O43462 519 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PRAMEF4O60810 478 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PEX11AO75192 247 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 KATNA1O75449 491 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CRCPO75575 148 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 RNASEH2AO75792 299 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 POP7O75817 140 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PCDH8O95206 1070 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 C1orf105O95561 183 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 GPR89BP0CG08 455 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 HOXB2P14652 356 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 IDO1P14902 403 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 COL9A1P20849 921 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 IGFBP4P22692 258 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 CCND1P24385 295 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ZFP36L2P47974 494 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PREPP48147 710 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ADPRHP54922 357 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 PFN3P60673 137 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ERVK-8P63133 956 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 EMX2Q04743 252 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ABRQ12979 859 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 RPA4Q13156 261 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 STX5Q13190 355 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 GTF2H3Q13889 308 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 LRP8Q14114 963 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 E2F2Q14209 437 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 FASTKQ14296 549 aaKnown RBP5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 STARD3Q14849 445 aa5.29□□□□□ -1.56
SCARNA20.4-201ENST00000516969 ABRAXAS2Q15018 415 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms