RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 NAB1Q13506 487 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 KRT33BQ14525 404 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC29A2Q14542 456 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 GBX1Q14549 363 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 PUM1Q14671 1186 aaKnown RBP eCLIP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 USP10Q14694 798 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 PLCL1Q15111 1095 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 KLHL38Q2WGJ6 581 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 TTLL9Q3SXZ7 439 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 ZNF449Q6P9G9 518 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 TMEM26Q6ZUK4 368 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 TMPRSS9Q7Z410 1059 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 ZNF438Q7Z4V0 828 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 TAX1BP1Q86VP1 789 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 SPATA6LQ8N4H0 392 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 EIF1ADQ8N9N8 165 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 OR2W6PQ8NHA6 318 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 ASZ1Q8WWH4 475 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 RSC1A1Q92681 617 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 INPP5DQ92835 1189 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 IL17FQ96PD4 163 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 GPR22Q99680 433 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 FUT8Q9BYC5 575 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 STN1Q9H668 368 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 XKR8Q9H6D3 395 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 RDH14Q9HBH5 336 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 EVA1BQ9NVM1 165 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 TAS2R13Q9NYV9 303 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 TMEM9Q9P0T7 183 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 CTNNAL1Q9UBT7 734 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 CORO1CQ9ULV4 474 aaPredicted RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 VWA7Q9Y334 891 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 DHRS7Q9Y394 339 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 COMMD10Q9Y6G5 202 aa9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 CNOT1A5YKK6 2376 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-209ENST00000513818 IGHV1OR21-1A0A087WYE8 117 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 HMX2A2RU54 273 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 KLHL33A6NCF5 533 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 PCNX2A6NKB5 2137 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 MAP3K7O43318 606 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 OPA1O60313 960 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SLCO2B1O94956 709 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 INHBAP08476 426 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 ZNF37AP17032 561 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 XRCC1P18887 633 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SPINK2P20155 84 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SDHBP21912 280 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SLCO1A2P46721 670 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC12A2P55011 1212 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 GFERP55789 205 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 FOXC1Q12948 553 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 MAP9Q49MG5 647 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 N4BP2L1Q5TBK1 243 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 GRTP1Q5TC63 336 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 MROH9Q5TGP6 573 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 HES3Q5TGS1 186 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 USP53Q70EK8 1073 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 CYS1Q717R9 158 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 DGLUCYQ7Z3D6 616 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 CHCHD4Q8N4Q1 142 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 C2orf73Q8N5S3 287 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 OR52E1Q8NGJ3 308 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 OR10G6Q8NH81 332 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 EPS8L3Q8TE67 593 aaKnown RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 DCAKDQ8WVC6 231 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 EEF1AKMT1Q8WVE0 214 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 ANKRD49Q8WVL7 239 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC44A1Q8WWI5 657 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 NUDT22Q9BRQ3 303 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 TRIT1Q9H3H1 467 aaKnown RBP9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 LRRN3Q9H3W5 708 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC40A1Q9NP59 571 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 LATS2Q9NRM7 1088 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 NCKIPSDQ9NZQ3 722 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 OGFRQ9NZT2 677 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 KLHL3Q9UH77 587 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 SLC24A2Q9UI40 661 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 ADAMTS6Q9UKP5 1117 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 RAB21Q9UL25 225 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 ICKQ9UPZ9 632 aa9.54□□□□□ -0.88
TOPBP1-209ENST00000513818 NPEPPSL1A6NEC2 478 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 LILRA5A6NI73 299 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 ARHGEF33A8MVX0 844 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 FOXO6A8MYZ6 492 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 D6RAR5 112 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 KPNA5O15131 536 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 HYAL3O43820 417 aaPredicted RBP9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 TSPAN12O95859 305 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 SYF2O95926 243 aaKnown RBP9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 PROS1P07225 676 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 TPBGLP0DKB5 382 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 CD1CP29017 333 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 SPRP35270 261 aaPredicted RBP9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 MSH2P43246 934 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 PDX1P52945 283 aa9.53□□□□□ -0.88
TOPBP1-209ENST00000513818 TUBB4BP68371 445 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms