RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 MFAP5Q13361 173 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 IFI16Q16666 785 aaKnown RBP10.79□□□□□ -0.68
RNF4-218ENST00000513284 ATP13A4Q4VNC1 1196 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 ISLR2Q6UXK2 745 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 PSMF1Q92530 271 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 NACC2Q96BF6 587 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 IQCDQ96DY2 449 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 TREX2Q9BQ50 279 aaPredicted RBP10.79□□□□□ -0.68
RNF4-218ENST00000513284 C17orf62Q9BQA9 187 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 LHPPQ9H008 270 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 ISCUQ9H1K1 167 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 PLA2G3Q9NZ20 509 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 SH3BGRL2Q9UJC5 107 aa10.79□□□□□ -0.68
RNF4-218ENST00000513284 GSAPA4D1B5 854 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 MGAT4DA6NG13 374 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 MYO1FO00160 1098 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 KCNK1O00180 336 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 GAPDHSO14556 408 aaPredicted RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 OR2B3O76000 313 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 CD63P08962 238 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 PBLDP30039 288 aaPredicted RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 SSR1P43307 286 aaKnown RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 GCGRP47871 477 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 CSNK1G2P78368 415 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 TMPRSS15P98073 1019 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 SLC25A11Q02978 314 aaKnown RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 ZBTB17Q13105 803 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 PRKAA1Q13131 559 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 GTF2H3Q13889 308 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 C3AR1Q16581 482 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 DEFB110Q30KQ9 67 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 FNBP1LQ5T0N5 605 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 CEP97Q8IW35 865 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 MAP7D3Q8IWC1 876 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 ADGRF3Q8IZF5 1079 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 ZNF655Q8N720 491 aaPredicted RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 AMER2Q8N7J2 671 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 NIPA2Q8N8Q9 360 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 GDAP1Q8TB36 358 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 PROKR1Q8TCW9 393 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 THOC3Q96J01 351 aaKnown RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 MAGEB10Q96LZ2 347 aaPredicted RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 TTC25Q96NG3 672 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 AP1M1Q9BXS5 423 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 XPO4Q9C0E2 1151 aaKnown RBP10.78□□□□□ -0.68
RNF4-218ENST00000513284 SRMSQ9H3Y6 488 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 EPS8L2Q9H6S3 715 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 NDOR1Q9UHB4 597 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 LCMT1Q9UIC8 334 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 ANAPC7Q9UJX3 599 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 AP1M2Q9Y6Q5 423 aa10.78□□□□□ -0.68
RNF4-218ENST00000513284 CACNA1CQ13936 2221 aa10.77□□□□□ -0.68
RNF4-218ENST00000513284 A0A1B0GTH6 734 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 CLDN14O95500 239 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 ONECUT2O95948 504 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 POLBP06746 335 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 MX2P20592 715 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 TNFSF10P50591 281 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 GBE1Q04446 702 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 NOMO1Q15155 1222 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 GPRC6AQ5T6X5 926 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 MTFR2Q6P444 385 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 NCCRP1Q6ZVX7 275 aaPredicted RBP10.77□□□□□ -0.69
RNF4-218ENST00000513284 OVCH1Q7RTY7 1134 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 TRIM73Q86UV7 250 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 FAM20CQ8IXL6 584 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 PQLC3Q8N755 202 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 DDHD1Q8NEL9 900 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 ACVR1CQ8NER5 493 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 OR11G2Q8NGC1 345 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 OR2L2Q8NH16 312 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 FLVCR1-AS1Q8TAF5 88 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 DTX3LQ8TDB6 740 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 LCN9Q8WX39 176 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 SYN2Q92777 582 aaPredicted RBP10.77□□□□□ -0.69
RNF4-218ENST00000513284 IMP4Q96G21 291 aaKnown RBP10.77□□□□□ -0.69
RNF4-218ENST00000513284 BTBD6Q96KE9 485 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 ZNF830Q96NB3 372 aaPredicted RBP10.77□□□□□ -0.69
RNF4-218ENST00000513284 SPSB2Q99619 263 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 NDC1Q9BTX1 674 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 XKR8Q9H6D3 395 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 SEC14L3Q9UDX4 400 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 ACSL5Q9ULC5 683 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 COLEC10Q9Y6Z7 277 aa10.77□□□□□ -0.69
RNF4-218ENST00000513284 FAM221AA4D161 298 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 MATN2O00339 956 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 FAM155BO75949 473 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 MT-CYBP00156 380 aaPredicted RBP10.76□□□□□ -0.69
RNF4-218ENST00000513284 SERPING1P05155 500 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 SKILP12757 684 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 HMGCLP35914 325 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 DPYSL3Q14195 570 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 PCSK7Q16549 785 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 NKG7Q16617 165 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 LDLRAP1Q5SW96 308 aa10.76□□□□□ -0.69
RNF4-218ENST00000513284 SHISA6Q6ZSJ9 500 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms