RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 INSM2Q96T92 566 aaPredicted RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 MRPL57Q9BQC6 102 aaKnown RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 SLC12A9Q9BXP2 914 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 IQCGQ9H095 443 aaKnown RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 ALG9Q9H6U8 611 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 IL21RQ9HBE5 538 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 KCNK9Q9NPC2 374 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 FAM86C1Q9NVL1 165 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 UCKL1Q9NWZ5 548 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 SCHIP1Q9P0W5 487 aaPredicted RBP12.23□□□□□ -0.45
PDPN-210ENST00000513143 ADAMTS6Q9UKP5 1117 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 EMCNQ9ULC0 261 aa12.23□□□□□ -0.45
PDPN-210ENST00000513143 FRYLO94915 3013 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 TMEM120BA0PK00 339 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 NPEPPSL1A6NEC2 478 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 OR5K4A6NMS3 321 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 OR52A4PA6NMU1 304 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 TARM1B6A8C7 271 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 TM9SF1O15321 606 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 PLIN3O60664 434 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 KERAO60938 352 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 C1orf105O95561 183 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 LMNAP02545 664 aaKnown RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 CATP04040 527 aaKnown RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 PROCP04070 461 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 ANXA6P08133 673 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 ENO2P09104 434 aaPredicted RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 SBK3P0C264 359 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 MTHFD1P11586 935 aaKnown RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 SLC2A4P14672 509 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 HALP42357 657 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 CCT8P50990 548 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 RPE65Q16518 533 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 TCEAL6Q6IPX3 200 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 OGFOD3Q6PK18 319 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 UBE2R2Q712K3 238 aaPredicted RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 FBXO15Q8NCQ5 510 aaPredicted RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 CFAP61Q8NHU2 1237 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 SAP25Q8TEE9 199 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 DENND1AQ8TEH3 1009 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 TCEAL3Q969E4 200 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 ATOH8Q96SQ7 321 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 MRPL46Q9H2W6 279 aaKnown RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 C12orf65Q9H3J6 166 aaKnown RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 RDH14Q9HBH5 336 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 PARVBQ9HBI1 364 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 SLC17A7Q9P2U7 560 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 RNF112Q9ULX5 631 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 ASF1AQ9Y294 204 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 OARD1Q9Y530 152 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 HEBP2Q9Y5Z4 205 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 CFAP20Q9Y6A4 193 aaKnown RBP12.22□□□□□ -0.45
PDPN-210ENST00000513143 DMDP11532 3685 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 OTOGLQ3ZCN5 2332 aa12.22□□□□□ -0.45
PDPN-210ENST00000513143 KIR2DS5A0A0G2JLQ3 304 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 A0A0G2JNG1 304 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 NEMP2A6NFY4 417 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 ARHGEF33A8MVX0 844 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 KIR2DS3K7RE56 304 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 PCDHGA12O60330 932 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 LRP3O75074 770 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 ZWINTO95229 277 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 RPN2P04844 631 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 GIMD1P0DJR0 217 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 XRCC1P18887 633 aaPredicted RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 CYP2A7P20853 494 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 HPDP32754 393 aaPredicted RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 ETV4P43268 484 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 PPP2R2AP63151 447 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 IL9RQ01113 521 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 KIR2DS5Q14953 304 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 TGFBIQ15582 683 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 PHKG1Q16816 387 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 C17orf82Q86X59 251 aaPredicted RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 TBC1D21Q8IYX1 336 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 NAGSQ8N159 534 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 SFRP1Q8N474 314 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 PHC3Q8NDX5 983 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 OR5K2Q8NHB8 316 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 MAGEC3Q8TD91 643 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 FAM111AQ96PZ2 611 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 GTPBP2Q9BX10 602 aaKnown RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 MVB12BQ9H7P6 319 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 IMP3Q9NV31 184 aaKnown RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 FAM53CQ9NYF3 392 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 ZNF624Q9P2J8 865 aaPredicted RBP12.21□□□□□ -0.45
PDPN-210ENST00000513143 PDE10AQ9Y233 779 aa12.21□□□□□ -0.45
PDPN-210ENST00000513143 GOLGA4Q13439 2230 aaKnown RBP12.2□□□□□ -0.46
PDPN-210ENST00000513143 LNP1A1A4G5 178 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
PDPN-210ENST00000513143 TK2O00142 265 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms