RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PPP1R32Q7Z5V6 425 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 PQLC3Q8N755 202 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 ACVR1CQ8NER5 493 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 DNAJB14Q8TBM8 379 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 PROKR1Q8TCW9 393 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 AP1M1Q9BXS5 423 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 SRMSQ9H3Y6 488 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 SMOXQ9NWM0 555 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 SPO11Q9Y5K1 396 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 CSAG2Q9Y5P2 127 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 EPN1Q9Y6I3 576 aaPredicted RBP13.47□□□□□ -0.25
SPCS3-204ENST00000513139 MYO1FO00160 1098 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A9O60656 530 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A6P19224 532 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A1P22309 533 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A4P22310 534 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 SPAM1P38567 509 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 SSR1P43307 286 aaKnown RBP13.46□□□□□ -0.25
SPCS3-204ENST00000513139 LMAN1P49257 510 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 DCDP81605 110 aaKnown RBP13.46□□□□□ -0.25
SPCS3-204ENST00000513139 CDC16Q13042 620 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 KRT33BQ14525 404 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 HIF1AQ16665 826 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 FNBP1LQ5T0N5 605 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 GPRC6AQ5T6X5 926 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 RPUSD3Q6P087 351 aaKnown RBP13.46□□□□□ -0.25
SPCS3-204ENST00000513139 CCDC170Q8IYT3 715 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 LCN9Q8WX39 176 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
SPCS3-204ENST00000513139 BTBD6Q96KE9 485 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 GBP5Q96PP8 586 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 CCM2Q9BSQ5 444 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A7Q9HAW7 530 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A10Q9HAW8 530 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 UGT1A8Q9HAW9 530 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
SPCS3-204ENST00000513139 NCOA6Q14686 2063 aaPredicted RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 GSAPA4D1B5 854 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 H3BMH7 237 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 H2AFZP0C0S5 128 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 CBSLP0DN79 551 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 CBSP35520 551 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 MAGEA1P43355 309 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 OTUD4Q01804 1114 aaKnown RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 TLR1Q15399 786 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 PPP2R5EQ16537 467 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 AGAP7PQ5VUJ5 663 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 PRAMEF13Q5VWM6 474 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 MRPL14Q6P1L8 145 aaKnown RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 FAM180AQ6UWF9 173 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 H2AFVQ71UI9 128 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 ITLN2Q8WWU7 325 aaPredicted RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 PDLIM2Q96JY6 352 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 LINC00615Q96LM1 132 aaPredicted RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 AGAP4Q96P64 663 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 CHRNA10Q9GZZ6 450 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 HACD3Q9P035 362 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 IL17CQ9P0M4 197 aa13.45□□□□□ -0.26
SPCS3-204ENST00000513139 IFT80Q9P2H3 777 aaPredicted RBP13.45□□□□□ -0.26
SPCS3-204ENST00000513139 GLYATL1P3A0A0U1RQE8 302 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 JRKO75564 520 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 OR2B3O76000 313 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 MT-CYBP00156 380 aaPredicted RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 EPOP01588 193 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 CYP1A2P05177 515 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 UMODP07911 640 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 MSH3P20585 1137 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 CYLC1P35663 651 aaPredicted RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 AP1B1Q10567 949 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 ZNF630Q2M218 657 aaPredicted RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 BCL7AQ4VC05 210 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 IRAK1BP1Q5VVH5 260 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 SPNS3Q6ZMD2 512 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 BNC2Q6ZN30 1099 aaPredicted RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 PARP9Q8IXQ6 854 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 NXPE1Q8N323 547 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 BCORP1Q8N888 145 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 N4BP2L2Q92802 583 aaPredicted RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 RNF157Q96PX1 679 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 TFB2MQ9H5Q4 396 aaKnown RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 EPS8L2Q9H6S3 715 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 OLAHQ9NV23 265 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 REXO2Q9Y3B8 237 aaKnown RBP13.44□□□□□ -0.26
SPCS3-204ENST00000513139 PCDHA13Q9Y5I0 950 aa13.44□□□□□ -0.26
SPCS3-204ENST00000513139 LOC285095A0A1B0GVY8 99 aa13.43□□□□□ -0.26
SPCS3-204ENST00000513139 C2orf74A8MZ97 194 aa13.43□□□□□ -0.26
SPCS3-204ENST00000513139 ZNF487B1APH4 448 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms