RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ANKRD20A3Q5VUR7 823 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 CPZQ66K79 652 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 AMIGO1Q86WK6 493 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 CDKL3Q8IVW4 592 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 SYTL1Q8IYJ3 562 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 GPR135Q8IZ08 494 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 ZBTB2Q8N680 514 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 FDCSPQ8NFU4 85 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 DENND1AQ8TEH3 1009 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 SGSM3Q96HU1 749 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 TRAPPC9Q96Q05 1148 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 RUFY1Q96T51 708 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 BAG1Q99933 345 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-216ENST00000512683 OR52A5Q9H2C5 316 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 GPR83Q9NYM4 423 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 POLG2Q9UHN1 485 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 UNC79Q9P2D8 2635 aa12.19□□□□□ -0.46
VEGFA-216ENST00000512683 GSAPA4D1B5 854 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 WIPF3A6NGB9 483 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 TMEM150CB9EJG8 249 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 F8W8V4 182 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 PSMB4P28070 264 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 ZNF658BQ4V348 819 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-216ENST00000512683 VWA5B1Q5TIE3 1220 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 HOOK3Q86VS8 718 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 KLHDC8BQ8IXV7 354 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 OR1L3Q8NH93 324 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 PROKR1Q8TCW9 393 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 TM9SF4Q92544 642 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 TFGQ92734 400 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-216ENST00000512683 FICDQ9BVA6 458 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 TLR10Q9BXR5 811 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 OR6C2Q9NZP2 312 aa12.18□□□□□ -0.46
VEGFA-216ENST00000512683 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 MACROD2A1Z1Q3 448 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 BTN3A3O00478 584 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 PEX12O00623 359 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 LIN7AO14910 233 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 ZNF185O15231 689 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 DDX3YO15523 660 aaKnown RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 KCNN4O15554 427 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 PSMD3O43242 534 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 ZNF749O43361 778 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 TJP3O95049 919 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 ST6GAL1P15907 406 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 PSMA3P25788 255 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 SHMT2P34897 504 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 UQCRFS1P47985 274 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 ZNF140P52738 457 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 ABRQ12979 859 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 BOP1Q14137 746 aaKnown RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 ZNF385CQ66K41 422 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 DENND5AQ6IQ26 1287 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 LCN10Q6JVE6 187 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 RHBDD2Q6NTF9 364 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 DUS1LQ6P1R4 473 aaKnown RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 TLDC1Q6P9B6 456 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 FAM198BQ6UWH4 519 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 KIAA1328Q86T90 577 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 IQCKQ8N0W5 287 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 OR52E1Q8NGJ3 308 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 COG1Q8WTW3 980 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 N4BP2L2Q92802 583 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 PTERQ96BW5 349 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 RNF31Q96EP0 1072 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 SPATA13Q96N96 652 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 APOL2Q9BQE5 337 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 NUDT9Q9BW91 350 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 AP1M1Q9BXS5 423 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 AMFRQ9UKV5 643 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 PACSIN2Q9UNF0 486 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-216ENST00000512683 SRPK3Q9UPE1 567 aa12.17□□□□□ -0.46
VEGFA-216ENST00000512683 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 TCP11X1B4DZS4 312 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 BTN3A1O00481 513 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 LDB2O43679 373 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-216ENST00000512683 ACRV1P26436 265 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 CDC25BP30305 580 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 NSG1P42857 185 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
VEGFA-216ENST00000512683 CACNG1Q06432 222 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 CHAF1BQ13112 559 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-216ENST00000512683 ITIH4Q14624 930 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 PARP6Q2NL67 630 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 SLC6A19Q695T7 634 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 FBXO38Q6PIJ6 1188 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 SPESP1Q6UW49 350 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 PEX26Q7Z412 305 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 TBC1D21Q8IYX1 336 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms