RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TSHZ1Q6ZSZ6 1077 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SV2AQ7L0J3 742 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BEND5Q7L4P6 421 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 VASH1Q7L8A9 365 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALNT7Q86SF2 657 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RTN4RL1Q86UN2 441 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HORMAD1Q86X24 394 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 THEM5Q8N1Q8 247 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTC30BQ8N4P2 665 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATG16L2Q8NAA4 619 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MDGA1Q8NFP4 955 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TCEAL3Q969E4 200 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 NCLNQ969V3 563 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADIPOR1Q96A54 375 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PBXIP1Q96AQ6 731 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MBD6Q96DN6 1003 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIC2Q96JB3 615 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CATSPER2Q96P56 530 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNPY3Q9BT09 278 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 COPS4Q9BT78 406 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KIFC1Q9BW19 673 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM2Q9C040 744 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABHD16BQ9H3Z7 469 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAD21L1Q9H4I0 556 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZBTB3Q9H5J0 574 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMURF2Q9HAU4 748 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC25A19Q9HC21 320 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BAIAP2L1Q9UHR4 511 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PADI4Q9UM07 663 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 B3GALT1Q9Y5Z6 326 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIGBOS1A0A0B4J2F0 54 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNF103-CHMP3A0A140T963 221 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SH2D7A6NKC9 451 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C4orf51C9J302 202 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EXTL3O43909 919 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACSL4O60488 711 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNX2O60749 519 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP11B1P15538 503 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP6V1B2P21281 511 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADRA1DP25100 572 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SSTR3P32745 418 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNR2P34972 360 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIK3CBP42338 1070 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CASP2P42575 452 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PHKA2P46019 1235 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CRKP46108 304 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LIG3P49916 1009 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CACNB3P54284 484 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 AQP4P55087 323 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPS11P62280 158 aaKnown RBP eCLIP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ROR2Q01974 943 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHRNEQ04844 493 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MPP3Q13368 585 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL18R1Q13478 541 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAMK2GQ13555 558 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTMR2Q13614 643 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 EFR3AQ14156 821 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 UBE2SQ16763 222 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPDYE7PQ495Y7 208 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTC31Q49AM3 519 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2CD6Q53TS8 623 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 YIF1BQ5BJH7 314 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM160B1Q5W0V3 765 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 B3GNT6Q6ZMB0 384 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BBS12Q6ZW61 710 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 DYMQ7RTS9 669 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZER1Q7Z7L7 766 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 DDX53Q86TM3 631 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 VSIG10LQ86VR7 867 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFNEQ86WN2 208 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM151BQ8IW70 566 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 RHOT2Q8IXI1 618 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BLIDQ8IZY5 108 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPAG16Q8N0X2 631 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CSGALNACT2Q8N6G5 542 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL17RDQ8NFM7 739 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR11H4Q8NGC9 324 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FLVCR1-AS1Q8TAF5 88 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SUN3Q8TAQ9 357 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBCKQ8TEA7 893 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GRK7Q8WTQ7 553 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 FBXW5Q969U6 566 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 LCORQ96JN0 433 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZFYVE19Q96K21 471 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ART5Q96L15 291 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKRD27Q96NW4 1050 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR52B2Q96RD2 323 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYTH2Q99418 400 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPA33Q99795 319 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHDC3Q9BQ90 382 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRRG4Q9BZD6 226 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 BRINP2Q9C0B6 783 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 MIXL1Q9H2W2 232 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERHL2Q9H4I8 314 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 COPS7BQ9H9Q2 264 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLEKHA5Q9HAU0 1116 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZBTB20Q9HC78 741 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 HMX1Q9NP08 348 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT84Q9NSB2 600 aa1.62□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM9Q9P0T7 183 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms