RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 RPE65Q16518 533 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 KRTCAP3Q53RY4 240 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 ARMC12Q5T9G4 340 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 C16orf47Q6ZP98 133 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-223ENST00000509900 CDHR3Q6ZTQ4 885 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 CEP128Q6ZU80 1094 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 ENOSF1Q7L5Y1 443 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 STRADAQ7RTN6 431 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 LRRTM4Q86VH4 590 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 ARHGAP12Q8IWW6 846 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 CPSF7Q8N684 471 aaKnown RBP9.2□□□□□ -0.94
PTPN20-223ENST00000509900 C3orf20Q8ND61 904 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 SIMC1Q8NDZ2 872 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 PROKR1Q8TCW9 393 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 CENPIQ92674 756 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-223ENST00000509900 PWWP2AQ96N64 755 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 NUDCD1Q96RS6 583 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 SLC30A3Q99726 388 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 AP1M1Q9BXS5 423 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 TRIM39Q9HCM9 518 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 SAMSN1Q9NSI8 373 aaKnown RBP9.2□□□□□ -0.94
PTPN20-223ENST00000509900 RNF6Q9Y252 685 aa9.2□□□□□ -0.94
PTPN20-223ENST00000509900 GPC6Q9Y625 555 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-223ENST00000509900 ZNF407Q9C0G0 2248 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 A0A0J9YYE9 177 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 ADARB2-AS1A8MUL3 147 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 FGF10O15520 208 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 KCNAB3O43448 404 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 HCRTR1O43613 425 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 KLK8O60259 260 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 FZD6O60353 706 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 SLC25A14O95258 325 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 PRAMEF1O95521 474 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 WDPCPO95876 746 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 TRBC1P01850 177 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 POLR2CP19387 275 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 CHRNB4P30926 498 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 SDC4P31431 198 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 HALP42357 657 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 SPINT3P49223 89 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 EPHB1P54762 984 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 DLX5P56178 289 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 HSF1Q00613 529 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 APBA1Q02410 837 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 IL10RBQ08334 325 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 OLIG2Q13516 323 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 KHDC1Q4VXA5 237 aaKnown RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 HMBOX1Q6NT76 420 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 ARMC6Q6NXE6 501 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 FGD2Q7Z6J4 655 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 GPR135Q8IZ08 494 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 SIRT6Q8N6T7 355 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 TMEM35BQ8NCS4 154 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 GOT1L1Q8NHS2 421 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 JOSD2Q8TAC2 188 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 BRIX1Q8TDN6 353 aaKnown RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 FAM172AQ8WUF8 416 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 ZFPM2Q8WW38 1151 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 ASB5Q8WWX0 329 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 HDAC10Q969S8 669 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 ZNF396Q96N95 335 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 TSG101Q99816 390 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 TRIM51Q9BSJ1 452 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 SPRTNQ9H040 489 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-223ENST00000509900 KLHL25Q9H0H3 589 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 FAM83DQ9H4H8 585 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 ALG2Q9H553 416 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 PSMD13Q9UNM6 376 aa9.19□□□□□ -0.94
PTPN20-223ENST00000509900 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 C2CD4BA6NLJ0 364 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 NPIPA5E9PKD4 350 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
PTPN20-223ENST00000509900 OR2B3O76000 313 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 TSPAN12O95859 305 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 HPP00738 406 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 CTSBP07858 339 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 PVRP15151 417 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 PFKFB1P16118 471 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 ITGAXP20702 1163 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 RFC1P35251 1148 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-223ENST00000509900 PTPN9P43378 593 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 MAXP61244 160 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 KEAP1Q14145 624 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 CCDC40Q4G0X9 1142 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 SHEQ5VZ18 495 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 NAPRTQ6XQN6 538 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 KRBA2Q6ZNG9 492 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 SIAH3Q8IW03 269 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 RAVER1Q8IY67 606 aaKnown RBP9.18□□□□□ -0.94
PTPN20-223ENST00000509900 CLYBLQ8N0X4 340 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 NPWQ8N729 165 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 MGME1Q9BQP7 344 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 RNF32Q9H0A6 362 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 MRM3Q9HC36 420 aaKnown RBP9.18□□□□□ -0.94
PTPN20-223ENST00000509900 ZNF160Q9HCG1 818 aa9.18□□□□□ -0.94
PTPN20-223ENST00000509900 SLC24A2Q9UI40 661 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms