RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 TROAPQ12815 778 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 GCNT6Q5T4J0 391 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 ALS2CLQ60I27 953 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 FIGLAQ6QHK4 219 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 FAM198BQ6UWH4 519 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 KCTD8Q6ZWB6 473 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 DET1Q7L5Y6 550 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 DNAJB7Q7Z6W7 309 aaPredicted RBP3.97□□□□□ -1.77
OTUD4-208ENST00000509620 CTAGE4Q8IX94 777 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 ZNF713Q8N859 430 aaPredicted RBP3.97□□□□□ -1.77
OTUD4-208ENST00000509620 MAB21L3Q8N8X9 362 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 OR13A1Q8NGR1 328 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 MOSPD2Q8NHP6 518 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 ROBO4Q8WZ75 1007 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 SMPDL3BQ92485 455 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 MTERF3Q96E29 417 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 ERO1AQ96HE7 468 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 FERMT1Q9BQL6 677 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 MGME1Q9BQP7 344 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 THUMPD3Q9BV44 507 aaKnown RBP3.97□□□□□ -1.77
OTUD4-208ENST00000509620 ABCF3Q9NUQ8 709 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 PRMT7Q9NVM4 692 aaPredicted RBP3.97□□□□□ -1.77
OTUD4-208ENST00000509620 CWC25Q9NXE8 425 aaPredicted RBP3.97□□□□□ -1.77
OTUD4-208ENST00000509620 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.97□□□□□ -1.77
OTUD4-208ENST00000509620 YIPF1Q9Y548 306 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 WDR81Q562E7 1941 aa3.97□□□□□ -1.77
OTUD4-208ENST00000509620 A0A1W2PS18 150 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ANXA2P2A6NMY6 339 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 SYNCRIPO60506 623 aaKnown RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PDE9AO76083 593 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ZNF432O94892 652 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 SIX3O95343 332 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 BAG2O95816 211 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 LDLRP01130 860 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PENKP01210 267 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 RAB40ALP0C0E4 278 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 NR1D1P20393 614 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 MARK3P27448 753 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 FMO5P49326 533 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 MLLT10P55197 1068 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 KRTAP10-9P60411 292 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PITX1P78337 314 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 GAGE5Q13069 117 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 GAGE6Q13070 117 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ZNF273Q14593 569 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ZRSR1Q15695 479 aaKnown RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 VWC2Q2TAL6 325 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 RNASEH2BQ5TBB1 312 aaKnown RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 SUSD1Q6UWL2 747 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PLXDC2Q6UX71 529 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PPP1R21Q6ZMI0 780 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 EXOC3L1Q86VI1 746 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 CNPY4Q8N129 248 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 GBGT1Q8N5D6 347 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 MSANTD4Q8NCY6 345 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PPFIBP2Q8ND30 876 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 RDM1Q8NG50 284 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 GOT1L1Q8NHS2 421 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 SPDL1Q96EA4 605 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 OXNAD1Q96HP4 312 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ABHD8Q96I13 439 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 PRMT6Q96LA8 375 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 FAM81BQ96LP2 452 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 TRPC7Q9HCX4 862 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 POMT1Q9Y6A1 747 aa3.96□□□□□ -1.78
OTUD4-208ENST00000509620 ZFP37Q9Y6Q3 630 aaPredicted RBP3.96□□□□□ -1.78
OTUD4-208ENST00000509620 A0A087WV48 116 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 A0A087WYN8 130 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 A0A1W2PPM1 405 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 EME2A4GXA9 379 aaPredicted RBP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 TRIM64A6NGJ6 449 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 TRIM64BA6NI03 449 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 CAPN9O14815 690 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 XRCC3O43542 346 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 SLU7O95391 586 aaKnown RBP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 BMP10O95393 424 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 GCNT3O95395 438 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 ATP5BP06576 529 aaKnown RBP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 KRT19P08727 400 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 OR2T7P0C7T2 308 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 ATP5DP30049 168 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 GABRA5P31644 462 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 SLC9A3P48764 834 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 BMXP51813 675 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 CAPZA1P52907 286 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 POU3F1Q03052 451 aaPredicted RBP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 PRKCZQ05513 592 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 RBPJQ06330 500 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 ACSM1Q08AH1 577 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 PLA2G7Q13093 441 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 PPIGQ13427 754 aaKnown RBP eCLIP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 SIRPB2Q5JXA9 342 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 SLC10A5Q5PT55 438 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 CAVIN1Q6NZI2 390 aaKnown RBP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 GLRX5Q86SX6 157 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 CCAR2Q8N163 923 aaKnown RBP3.95□□□□□ -1.78
OTUD4-208ENST00000509620 NDUFAF2Q8N183 169 aa3.95□□□□□ -1.78
OTUD4-208ENST00000509620 OR2AJ1Q8NGZ0 328 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms