RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 SLC52A3Q9NQ40 469 aa3.03□□□□□ -1.92
OTUD4-207ENST00000509517 SLC35C2Q9NQQ7 365 aa3.03□□□□□ -1.92
OTUD4-207ENST00000509517 CPSF2Q9P2I0 782 aaKnown RBP3.03□□□□□ -1.92
OTUD4-207ENST00000509517 CRNNQ9UBG3 495 aaPredicted RBP3.03□□□□□ -1.92
OTUD4-207ENST00000509517 SLC7A7Q9UM01 511 aa3.03□□□□□ -1.92
OTUD4-207ENST00000509517 NME7Q9Y5B8 376 aa3.03□□□□□ -1.92
OTUD4-207ENST00000509517 A0A1W2PRB8 838 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 HYKKA2RU49 373 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 ANKUB1A6NFN9 424 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 E9PI62 339 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CCER2I3L3R5 266 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 PCDH7O60245 1069 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 PLOD3O60568 738 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 SOCS5O75159 536 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CAVIN2O95810 425 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 AKR1B1P15121 316 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CRIP2P52943 208 aaPredicted RBP3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CDH11P55287 796 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CDH13P55290 713 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CX3CL1P78423 397 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 BMP2KLQ5H9B9 411 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 MDH1BQ5I0G3 518 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 GARNL3Q5VVW2 1013 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 CORO6Q6QEF8 472 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 MFSD6Q6ZSS7 791 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 TMPRSS11FQ6ZWK6 438 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 ISCA2Q86U28 154 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 TMEM173Q86WV6 379 aaPredicted RBP3.02□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF595Q8IYB9 648 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF843Q8N446 348 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 PPFIBP2Q8ND30 876 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 OLIG1Q8TAK6 271 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 RNF128Q8TEB7 428 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 DGAT2Q96PD7 388 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 DUX3Q96PT4 197 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 MYADMQ96S97 322 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 RTP3Q9BQQ7 232 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 RHNO1Q9BSD3 238 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 BTBD10Q9BSF8 475 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 LMF2Q9BU23 707 aaKnown RBP3.02□□□□□ -1.93
OTUD4-207ENST00000509517 KLHL4Q9C0H6 718 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 ARRDC1-AS1Q9H2J1 176 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 TBC1D17Q9HA65 648 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 GDE1Q9NZC3 331 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 MORF4L1Q9UBU8 362 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 GIMAP2Q9UG22 337 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 OSGIN1Q9UJX0 560 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 PPIEQ9UNP9 301 aaKnown RBP3.02□□□□□ -1.93
OTUD4-207ENST00000509517 MAGED1Q9Y5V3 778 aaPredicted RBP3.02□□□□□ -1.93
OTUD4-207ENST00000509517 KIAA1210Q9ULL0 1709 aa3.02□□□□□ -1.93
OTUD4-207ENST00000509517 A0A0G2JLW4 131 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 TMEM221A6NGB7 291 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 PLOD2O00469 737 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 GAPDHSO14556 408 aaPredicted RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 CLIC2O15247 247 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 EDIL3O43854 480 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 OR2T7P0C7T2 308 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 PRSS56P0CW18 603 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 DNASE1P24855 282 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 MATR3P43243 847 aaKnown RBP eCLIP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 LMAN1P49257 510 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 LIG4P49917 911 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 LGALS3BPQ08380 585 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 SNAPC1Q16533 368 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF876PQ49A33 203 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 CBWD6Q4V339 395 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 CBWD3Q5JTY5 395 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 CFAP58Q5T655 872 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 RNASEH2BQ5TBB1 312 aaKnown RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 FAM53AQ6NSI3 398 aaPredicted RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 KRT77Q7Z794 578 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF554Q86TJ5 538 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 PRPF39Q86UA1 669 aaKnown RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 NKAIN3Q8N8D7 197 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 TRIML1Q8N9V2 468 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 OR5M8Q8NGP6 311 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 OR1J1Q8NGS3 322 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 EXD1Q8NHP7 514 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 CFAP61Q8NHU2 1237 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 FGFBP3Q8TAT2 258 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 GRHL3Q8TE85 626 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 HSD17B8Q92506 261 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 PTERQ96BW5 349 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 SPACA9Q96E40 222 aaPredicted RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 FSD1Q9BTV5 496 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 TRAF4Q9BUZ4 470 aaPredicted RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 APOL6Q9BWW8 343 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 SIX2Q9NPC8 291 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 EQTNQ9NQ60 294 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 ECHDC1Q9NTX5 307 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 DDX43Q9NXZ2 648 aaKnown RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 NKIRAS2Q9NYR9 191 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 TUBE1Q9UJT0 475 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 ZHX1Q9UKY1 873 aaPredicted RBP3.01□□□□□ -1.93
OTUD4-207ENST00000509517 MTUS1Q9ULD2 1270 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 FAM169AQ9Y6X4 670 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 SMCHD1A6NHR9 2005 aa3.01□□□□□ -1.93
OTUD4-207ENST00000509517 hCG_1809904A0A1W2PP81 198 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 A0A1W2PPE2 198 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 A0A1W2PR64 198 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms