RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FAM220BPB1ANY3 271 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 E7EQ34 232 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 MAGEB3O15480 346 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 PSTPIP1O43586 416 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 CCNT2O60583 730 aaKnown RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 CD63P08962 238 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 RHOQP17081 205 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 NFATC3Q12968 1075 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 IRF4Q15306 451 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 MAPKAPK3Q16644 382 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 GALNTL6Q49A17 601 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 KCTD16Q68DU8 428 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC6AQ6EIG7 209 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 FSTL4Q6MZW2 842 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 HSDL2Q6YN16 418 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TRPM8Q7Z2W7 1104 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM200AQ86VY9 491 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 NKAIN4Q8IVV8 208 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TP53INP2Q8IXH6 220 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM130Q8N3G9 435 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TERB1Q8NA31 727 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ANKK1Q8NFD2 765 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 PMEPA1Q969W9 287 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 FER1L6-AS2Q96M78 137 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 CYTH2Q99418 400 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ADAM33Q9BZ11 813 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SHCBP1LQ9BZQ2 653 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 LRRN3Q9H3W5 708 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ETAA1Q9NY74 926 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF624Q9P2J8 865 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 FZD10Q9ULW2 581 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 PLAGL1Q9UM63 463 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 RAXQ9Y2V3 346 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 LOXL2Q9Y4K0 774 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ANK1P16157 1881 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 MTCL1Q9Y4B5 1905 aaKnown RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ERI2A8K979 691 aaKnown RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 POLR1CO15160 346 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SLC7A4O43246 635 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 MGRN1O60291 552 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SPAG7O75391 227 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 STC2O76061 302 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SNRPB2P08579 225 aaKnown RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 MC4RP32245 332 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SOX6P35712 828 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 GCGRP47871 477 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SSTP61278 116 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 RPS24P62847 133 aaKnown RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 FAM189BP81408 668 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 KCNMA1Q12791 1236 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ERV3-1Q14264 604 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 RFTN1Q14699 578 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 CBWD6Q4V339 395 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM196Q5HYL7 178 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 KRBOX4Q5JUW0 171 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 UNQ6494/PRO21346Q6UXR6 183 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM92Q6UXU6 159 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF761Q86XN6 746 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ELOA2Q8IYF1 753 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SLC4A11Q8NBS3 891 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 OR4E2Q8NGC2 313 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 RMND5BQ96G75 393 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 RADILQ96JH8 1075 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 PHF12Q96QT6 1004 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 OR2M4Q96R27 311 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 KCTD15Q96SI1 283 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF717Q9BY31 904 aaPredicted RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 UCK1Q9HA47 277 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 NECTIN3Q9NQS3 549 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 FKBP14Q9NWM8 211 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 PPP2R2CQ9Y2T4 447 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 PCDHGB5Q9Y5G0 923 aa2.9□□□□□ -1.94
NEDD4-208ENST00000508342 OAS3Q9Y6K5 1087 aaKnown RBP2.9□□□□□ -1.94
NEDD4-208ENST00000508342 SMIM31A0A1B0GVY4 71 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SAC3D1A6NKF1 404 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ZBTB42B2RXF5 422 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PTGESO14684 152 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PI15O43692 258 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 MAN1A2O60476 641 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 BRINP1O60477 761 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PAK4O96013 591 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 GIMD1P0DJR0 217 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 COX6B1P14854 86 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 NQO1P15559 274 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 PRKCHP24723 683 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CD70P32970 193 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 MAN2A2P49641 1150 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 ATP12AP54707 1039 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CCL7P80098 99 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CUL3Q13618 768 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 DPCR1Q3MIW9 517 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 LACTB2Q53H82 288 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 VWA2Q5GFL6 755 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC137Q6PK04 289 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 UBE2R2Q712K3 238 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 SLC29A4Q7RTT9 530 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 FAM71DQ8N9W8 422 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 TSPAN14Q8NG11 270 aa2.9□□□□□ -1.95
NEDD4-208ENST00000508342 RP9Q8TA86 221 aaKnown RBP2.9□□□□□ -1.95
NEDD4-208ENST00000508342 C9orf43Q8TAL5 461 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms