RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PKP2Q99959 881 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 CNOT11Q9UKZ1 510 aaKnown RBP17.27■□□□□ 0.36
SFXN1-208ENST00000507823 RNF11Q9Y3C5 154 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 COL4A3Q01955 1670 aa17.27■□□□□ 0.36
SFXN1-208ENST00000507823 DENND4AQ7Z401 1863 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 AQP12BA6NM10 295 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 RNASEH2AO75792 299 aaKnown RBP17.27■□□□□ 0.35
SFXN1-208ENST00000507823 CA3P07451 260 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 UQCRBP14927 111 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 AQP4P55087 323 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 ST8SIA6P61647 398 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 HSPA14Q0VDF9 509 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 EIF4HQ15056 248 aaKnown RBP17.27■□□□□ 0.35
SFXN1-208ENST00000507823 RFTN2Q52LD8 501 aaPredicted RBP17.27■□□□□ 0.35
SFXN1-208ENST00000507823 DHFR2Q86XF0 187 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 PTRH1Q86Y79 214 aaKnown RBP17.27■□□□□ 0.35
SFXN1-208ENST00000507823 AQP12AQ8IXF9 295 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 KLHDC8AQ8IYD2 350 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 L3MBTL4Q8NA19 623 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 SLC45A3Q96JT2 553 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 EBF3Q9H4W6 596 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 DTNAQ9Y4J8 743 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 AP4S1Q9Y587 144 aa17.27■□□□□ 0.35
SFXN1-208ENST00000507823 PRRT4C9JH25 899 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 CLDN9O95484 217 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 PRNPP04156 253 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 G6PDP11413 515 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 PRPH2P23942 346 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 EEFSECP57772 596 aaKnown RBP17.26■□□□□ 0.35
SFXN1-208ENST00000507823 CREB5Q02930 508 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF284Q2VY69 593 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 IL23RQ5VWK5 629 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ERAP2Q6P179 960 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 DET1Q7L5Y6 550 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ASZ1Q8WWH4 475 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 SMARCD2Q92925 531 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 GLYATL1Q969I3 302 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 NXPE3Q969Y0 559 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 VPS33AQ96AX1 596 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 SFXN1Q9H9B4 322 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ARMC1Q9NVT9 282 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ACTR3BQ9P1U1 418 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 C15orf38-AP3S2A0A0A6YYH1 394 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ULK1O75385 1050 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 CYP2A7P20853 494 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 NFYCQ13952 458 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 HNRNPA1L2Q32P51 320 aaKnown RBP17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF658BQ4V348 819 aaPredicted RBP17.26■□□□□ 0.35
SFXN1-208ENST00000507823 ARPINQ7Z6K5 226 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 RBM23Q86U06 439 aaKnown RBP17.26■□□□□ 0.35
SFXN1-208ENST00000507823 NLRP8Q86W28 1048 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 C12orf76Q8N812 135 aaPredicted RBP17.26■□□□□ 0.35
SFXN1-208ENST00000507823 OR2T34Q8NGX1 318 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 OR2T3Q8NH03 318 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 FBXL8Q96CD0 374 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 EPHX3Q9H6B9 360 aa17.26■□□□□ 0.35
SFXN1-208ENST00000507823 COPS7BQ9H9Q2 264 aaPredicted RBP17.26■□□□□ 0.35
SFXN1-208ENST00000507823 MAGEA13PA6NCF6 341 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 GSTM1P09488 218 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 PCSK2P16519 638 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 ATP6V1B2P21281 511 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 XPAP23025 273 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 ITGB7P26010 798 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 PRLHRP49683 370 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 YBX1P67809 324 aaKnown RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 GSTM4Q03013 218 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 MESP2Q0VG99 397 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 BOP1Q14137 746 aaKnown RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 LRRC36Q1X8D7 754 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 MAP7D1Q3KQU3 841 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 C9orf64Q5T6V5 341 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 ZNF765Q7L2R6 523 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 GLMNQ92990 594 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 DTD2Q96FN9 168 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 MAGEB10Q96LZ2 347 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 YY1AP1Q9H869 796 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 GMPR2Q9P2T1 348 aaKnown RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 CHD9Q3L8U1 2897 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 TCF20Q9UGU0 1960 aaKnown RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 LRRK1Q38SD2 2015 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 DNAJA2O60884 412 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 PSIP1O75475 530 aaKnown RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 HIST1H2AGP0C0S8 130 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 HIST1H2ADP20671 130 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 ARL1P40616 181 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 CAPRIN1Q14444 709 aaKnown RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 FAM109BQ6ICB4 259 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-208ENST00000507823 KIAA2013Q8IYS2 634 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 VN1R2Q8NFZ6 395 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 HIST1H2AHQ96KK5 128 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 HIST1H2AJQ99878 128 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 P2RY13Q9BPV8 354 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 H2AFJQ9BTM1 129 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 TRIM15Q9C019 465 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 IL1RL2Q9HB29 575 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 KLQ9UEF7 1012 aa17.25■□□□□ 0.35
SFXN1-208ENST00000507823 EDDM13A0A1B0GTR0 161 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 VGLL3A8MV65 326 aa17.24■□□□□ 0.35
SFXN1-208ENST00000507823 GRXCR1A8MXD5 290 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms