RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RBM44Q6ZP01 1051 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DET1Q7L5Y6 550 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TMPRSS7Q7RTY8 843 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 EFL1Q7Z2Z2 1120 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DGLUCYQ7Z3D6 616 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 PIM3Q86V86 326 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 MYO1HQ8N1T3 1032 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TCAIMQ8N3R3 496 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DCBLD1Q8N8Z6 715 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DEFB124Q8NES8 71 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 RHEBL1Q8TAI7 183 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 CD200R1Q8TD46 325 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 MCOLN3Q8TDD5 553 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 FBF1Q8TES7 1133 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ASB11Q8WXH4 323 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 AHCYL2Q96HN2 611 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 C9orf72Q96LT7 481 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 GFM1Q96RP9 751 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ZPBPQ9BS86 351 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DHRS4Q9BTZ2 278 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TMEM109Q9BVC6 243 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 SLC12A9Q9BXP2 914 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 NRSN2Q9GZP1 204 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DERL2Q9GZP9 239 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 LRRN3Q9H3W5 708 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ENAMQ9NRM1 1142 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 INTS7Q9NVH2 962 aaKnown RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 TOR4AQ9NXH8 423 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 KCNK4Q9NYG8 393 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ZNF624Q9P2J8 865 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ANKMY1Q9P2S6 941 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 DKK4Q9UBT3 224 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ASF1AQ9Y294 204 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 BTBD3Q9Y2F9 522 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 CRYL1Q9Y2S2 319 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 NEUROG3Q9Y4Z2 214 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ST14Q9Y5Y6 855 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 ACACAQ13085 2346 aa8.25□□□□□ -1.09
PDGFC-205ENST00000506880 IGHV1OR21-1A0A087WYE8 117 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 EXOC1LA0A1B0GW35 172 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 FAM95CA0A1B0GW59 222 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 TLCD2A6NGC4 264 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 SYCE1LA8MT33 242 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 D6RAR5 112 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 MYO1CO00159 1063 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 GPR39O43194 453 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 DXOO77932 396 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 IPO13O94829 963 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 UBXN7O94888 489 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CCNDBP1O95273 360 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 MPOP05164 745 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 GSTA1P08263 222 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 ITGA2BP08514 1039 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 SNRPAP09012 282 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 HIST1H2AGP0C0S8 130 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 HIST1H2ADP20671 130 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CD82P27701 267 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 MAP4P27816 1152 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 GABRB3P28472 473 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 MSH2P43246 934 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CAPZBP47756 277 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 SERPINB8P50452 374 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 RAB10P61026 200 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 IL9RQ01113 521 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 ZFP36L1Q07352 338 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 HSPA14Q0VDF9 509 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CLCA4Q14CN2 919 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CYP2A13Q16696 494 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 FAM83EQ2M2I3 478 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 FAM182AQ5T1J6 154 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 HECTD2Q5U5R9 776 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 ANKS6Q68DC2 871 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 KLC3Q6P597 504 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CNSTQ6PJW8 725 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PRSS42Q7Z5A4 293 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CTAGE3PQ8IX95 158 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CCL4L1Q8NHW4 92 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 DENND1AQ8TEH3 1009 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 AENQ8WTP8 325 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC74AQ96AQ1 378 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 SEC16BQ96JE7 1060 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 HIST1H2AHQ96KK5 128 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 UBXN10Q96LJ8 280 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 RMDN2Q96LZ7 410 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC138Q96M89 665 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 TEFMQ96QE5 360 aaKnown RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 GPR21Q99679 349 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 HIST1H2AJQ99878 128 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CCDC3Q9BQI4 270 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 H2AFJQ9BTM1 129 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 CAPS2Q9BXY5 557 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PITHD1Q9GZP4 211 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 WWP1Q9H0M0 922 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PARVBQ9HBI1 364 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 NMRAL1Q9HBL8 299 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 FSCN3Q9NQT6 498 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PRDM8Q9NQV8 689 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 FBXO6Q9NRD1 293 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 C1GALT1Q9NS00 363 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms