RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SLC5A12Q1EHB4 618 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 DNTTIP2Q5QJE6 756 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CROCCP2Q86T23 111 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 HID1Q8IV36 788 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 GRAMD1AQ96CP6 724 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CPNE7Q9UBL6 633 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CRYL1Q9Y2S2 319 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 V9GYY5 206 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 NEMP2A6NFY4 417 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 B4GAT1O43505 415 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 GDF9O60383 454 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 KERAO60938 352 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SNRPAP09012 282 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 ACP5P13686 325 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 HSD17B2P37059 387 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CASP2P42575 452 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 GPLD1P80108 840 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 ILF3Q12906 894 aaKnown RBP eCLIP8.06□□□□□ -1.129e-7■■■■■ 35.7
CDC42SE2-208ENST00000505065 SUZ12Q15022 739 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR4D1Q15615 310 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 PERM1Q5SV97 790 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 AGBL2Q5U5Z8 902 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 DCBLD1Q8N8Z6 715 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRR11Q96HE9 360 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 MYOCQ99972 504 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SPRY4Q9C004 299 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SIDT1Q9NXL6 827 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 HAO1Q9UJM8 370 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 PCSK5Q92824 1860 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 IGHV1OR21-1A0A087WYE8 117 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 TAPBPO15533 448 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 IDSP22304 550 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCKBRP32239 447 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 KCNC1P48547 511 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMEM26Q6ZUK4 368 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 MED25Q71SY5 747 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SLC9B2Q86UD5 537 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 DCUN1D3Q8IWE4 304 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR2I1PQ8NGU4 316 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMEM79Q9BSE2 394 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SYTL2Q9HCH5 934 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 ACSL6Q9UKU0 697 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 PDE10AQ9Y233 779 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 PLAAQ9Y263 795 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 FER1L5A0AVI2 2057 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 GFRA3O60609 400 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CSF2RBP32927 897 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 AP1S2P56377 157 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRRT3Q5FWE3 981 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMPRSS9Q7Z410 1059 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 ARHGAP22Q7Z5H3 698 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PHC3Q8NDX5 983 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 MAPK15Q8TD08 544 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 LMX1AQ8TE12 382 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 L3HYPDHQ96EM0 354 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 NDNQ99608 321 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZNHIT2Q9UHR6 403 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRKAB1Q9Y478 270 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 A0A1W2PQM1 296 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 G3V2L1 256 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 APOA4P06727 396 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CAPZBP47756 277 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 DNAJB13P59910 316 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CASP8Q14790 479 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PCBP2Q15366 365 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■■■■■ 27.5
CDC42SE2-208ENST00000505065 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 BMPERQ8N8U9 685 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CAMK1GQ96NX5 476 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PILRAQ9UKJ1 303 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 BTRCQ9Y297 605 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 MUC6Q6W4X9 2439 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 EXOC1LA0A1B0GW35 172 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 NPIPB8E9PQR5 432 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 C2P06681 752 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 LPAL2Q16609 132 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CRTC3Q6UUV7 619 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 DET1Q7L5Y6 550 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CHST15Q7LFX5 561 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 TRAPPC5Q8IUR0 188 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 RDH11Q8TC12 318 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 ELMO1Q92556 727 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 NAT6Q93015 286 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 RAB11FIP5Q9BXF6 653 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 PSD3Q9NYI0 1048 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR6C2Q9NZP2 312 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 SENP1Q9P0U3 644 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 CTNNAL1Q9UBT7 734 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 POMT2Q9UKY4 750 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 KCNK6Q9Y257 313 aa8.05□□□□□ -1.12
CDC42SE2-208ENST00000505065 IGKV1-8A0A0C4DH67 115 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 STX16-NPEPL1H3BU86 382 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 STX16O14662 325 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 KRT38O76015 456 aa8.04□□□□□ -1.12
CDC42SE2-208ENST00000505065 SYF2O95926 243 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms