RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 STK16O75716 305 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 ATP5HO75947 161 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 SIX3O95343 332 aaPredicted RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 ESRRBO95718 433 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 LMNAP02545 664 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 CHRNGP07510 517 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 ACADLP28330 430 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 MAT2AP31153 395 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 IGFALSP35858 605 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 IDH3AP50213 366 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 CLCNKAP51800 687 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 KIAA1024LP59773 190 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 PFN3P60673 137 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 CSTF1Q05048 431 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 LCP2Q13094 533 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 LACTB2Q53H82 288 aaPredicted RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 PYCR3Q53H96 274 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 UNC5DQ6UXZ4 953 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 CCDC121Q6ZUS5 278 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 EFL1Q7Z2Z2 1120 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 CUZD1Q86UP6 607 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 TRIM74Q86UV6 250 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 DCP2Q8IU60 420 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 CADM4Q8NFZ8 388 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 NAT14Q8WUY8 206 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 FBXL8Q96CD0 374 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 MOCOSQ96EN8 888 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 THOC1Q96FV9 657 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 MAGEB10Q96LZ2 347 aaPredicted RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 RILPQ96NA2 401 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 EGFL8Q99944 293 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 TIMM29Q9BSF4 260 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 NTMT1Q9BV86 223 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 SAR1AQ9NR31 198 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 ARL15Q9NXU5 204 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 UTP6Q9NYH9 597 aaKnown RBP9.91□□□□□ -0.82
DDX41-203ENST00000504781 PCTPQ9UKL6 214 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 OR1A2Q9Y585 309 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 BPTFQ12830 3046 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 DOCK9Q9BZ29 2069 aa9.91□□□□□ -0.82
DDX41-203ENST00000504781 NCF1BA6NI72 391 aaPredicted RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 NCF1CA8MVU1 366 aaPredicted RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 K7EPI3 171 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 UBFD1O14562 309 aaKnown RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 VPS4BO75351 444 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 KIAA0754O94854 1291 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 GUCA1CO95843 209 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 OTCP00480 354 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 RPN2P04844 631 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 SERPINA6P08185 405 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 EBLN1P0CF75 366 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 UROSP10746 265 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 NCF1P14598 390 aaPredicted RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 EPB42P16452 691 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 PDHA2P29803 388 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 ADSLP30566 484 aaPredicted RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 HOXA6P31267 233 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 HSD17B2P37059 387 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 CXCL12P48061 93 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 AGTR2P50052 363 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 CDH13P55290 713 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 IRX1P78414 480 aaPredicted RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 PCDH1Q08174 1060 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 DMTNQ08495 405 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 GTF2H2Q13888 395 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 PTK2BQ14289 1009 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 PHKG1Q16816 387 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 UGT3A2Q3SY77 523 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 GALNTL6Q49A17 601 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 SH2D4BQ5SQS7 431 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 FAM91A1Q658Y4 838 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 CAPRIN2Q6IMN6 1127 aaKnown RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 GTF2H2CQ6P1K8 395 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 FOXR1Q6PIV2 292 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 SLC36A4Q6YBV0 504 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 ACAD11Q709F0 780 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 MTDHQ86UE4 582 aaKnown RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 KLHDC8AQ8IYD2 350 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 FITM2Q8N6M3 262 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 PHC3Q8NDX5 983 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 CEP70Q8NHQ1 597 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 TRPC4APQ8TEL6 797 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 SETD7Q8WTS6 366 aaKnown RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 EXT2Q93063 718 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 TOE1Q96GM8 510 aaKnown RBP9.9□□□□□ -0.82
DDX41-203ENST00000504781 ZNF382Q96SR6 550 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 MID1IP1Q9NPA3 183 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 OPTCQ9UBM4 332 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 TRIM33Q9UPN9 1127 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 ANGPTL3Q9Y5C1 460 aa9.9□□□□□ -0.82
DDX41-203ENST00000504781 ANKRD12Q6UB98 2062 aa9.89□□□□□ -0.83
DDX41-203ENST00000504781 CCDC163A0A0D9SF12 145 aa9.89□□□□□ -0.83
DDX41-203ENST00000504781 A0A1W2PPC4 97 aa9.89□□□□□ -0.83
DDX41-203ENST00000504781 POM121BA6NF01 834 aa9.89□□□□□ -0.83
DDX41-203ENST00000504781 TMEM202A6NGA9 273 aa9.89□□□□□ -0.83
DDX41-203ENST00000504781 ERICH4A6NGS2 130 aa9.89□□□□□ -0.83
DDX41-203ENST00000504781 METTL12A8MUP2 240 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms