RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ERLIN1O75477 346 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 WISP3O95389 354 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 TSPAN12O95859 305 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 ALDOAP04075 364 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 TPBGLP0DKB5 382 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 MPC1LP0DKB6 136 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 GLB1P16278 677 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 STMN1P16949 149 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 CSRP1P21291 193 aaKnown RBP12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 CD9P21926 228 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 ALDH4A1P30038 563 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 ACADVLP49748 655 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 SERPINB9P50453 376 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 DUSP3P51452 185 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 RP1P56715 2156 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 IL2P60568 153 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 CCL7P80098 99 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 IRF9Q00978 393 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 PLOD1Q02809 727 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 DLG1Q12959 904 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 AMZ1Q400G9 498 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 SLCO6A1Q86UG4 719 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 TSPAN17Q96FV3 270 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC38A3Q99624 504 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 CCDC3Q9BQI4 270 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 SYNDIG1Q9H7V2 258 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 POT1Q9NUX5 634 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 TOR4AQ9NXH8 423 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC24A2Q9UI40 661 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 ZNF180Q9UJW8 692 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 ADAMTS6Q9UKP5 1117 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
PDLIM7-212ENST00000504380 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 A0A1W2PPM1 405 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 NPEPPSL1A6NEC2 478 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 ARHGEF33A8MVX0 844 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 CDC7O00311 574 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 NUDT21O43809 227 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 KRT38O76015 456 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 KCNK5O95279 499 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 MATN4O95460 622 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 C1orf105O95561 183 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 C2P06681 752 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 SNRPAP09012 282 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 NUDT17P0C025 328 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 SLC35E2BP0CK96 405 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 CCDC166P0CW27 439 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 CBSLP0DN79 551 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 ZNF37AP17032 561 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 TYRP1P17643 537 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 ACP1P24666 158 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 TYK2P29597 1187 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 ATP5DP30049 168 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 CBSP35520 551 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 FASLGP48023 281 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 PPM1FP49593 454 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 RGS4P49798 205 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 CSHL1Q14406 222 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 TMEM26Q6ZUK4 368 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 USP53Q70EK8 1073 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 C2orf73Q8N5S3 287 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 OR52E1Q8NGJ3 308 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 KCTD4Q8WVF5 259 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 DLG3Q92796 817 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 IL17FQ96PD4 163 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 VPS11Q9H270 941 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 TRIT1Q9H3H1 467 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 KCNK4Q9NYG8 393 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 PSMC3IPQ9P2W1 217 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 ATXN7L1Q9ULK2 861 aaPredicted RBP12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 HEBP2Q9Y5Z4 205 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
PDLIM7-212ENST00000504380 A0A096LPK6 155 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 GOLGA8RI6L899 631 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 RASGRF2O14827 1237 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 TOP3BO95985 862 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 ENO3P13929 434 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 CRABP2P29373 138 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 SERPINB8P50452 374 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 GRB7Q14451 532 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 PLCL1Q15111 1095 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 FBXO38Q6PIJ6 1188 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 UNC5DQ6UXZ4 953 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 NEK10Q6ZWH5 1172 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 UBE2R2Q712K3 238 aaPredicted RBP12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 TAOK1Q7L7X3 1001 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 ZNF438Q7Z4V0 828 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 SPRED1Q7Z699 444 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 TBC1D21Q8IYX1 336 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 NKAPQ8N5F7 415 aaKnown RBP12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 OR5K2Q8NHB8 316 aa12.9□□□□□ -0.34
PDLIM7-212ENST00000504380 MZB1Q8WU39 189 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms