RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 MANBAO00462 879 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 ENPP3O14638 875 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 TALDO1P37837 337 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 CLCN2P51788 898 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 SP140Q13342 867 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 PLA2G4EQ3MJ16 856 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 KLHDC10Q6PID8 442 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 BRAT1Q6PJG6 821 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 CHCHD4Q8N4Q1 142 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 SLC38A2Q96QD8 506 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 TCF25Q9BQ70 676 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 EMCNQ9ULC0 261 aa10.57□□□□□ -0.72
LIMCH1-205ENST00000503057 WASH4PA8MWX3 477 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SLC28A2O43868 658 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CLDN7O95471 211 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SOD2P04179 222 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 GALTP07902 379 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 MAGEA3P43357 314 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PTPN5P54829 565 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 LSM3P62310 102 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 TUBA4AP68366 448 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SIM2Q14190 667 aaPredicted RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 MYLK3Q32MK0 819 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 TMEM220Q6QAJ8 160 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 C17orf99Q6UX52 265 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CFAP206Q8IYR0 622 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CPA6Q8N4T0 437 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 C10orf53Q8N6V4 93 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SH3RF2Q8TEC5 729 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 WFIKKN2Q8TEU8 576 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 NODALQ96S42 347 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CD244Q9BZW8 370 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 REXO4Q9GZR2 422 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SEMA3GQ9NS98 782 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 DUS2Q9NX74 493 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 DHRS7Q9Y394 339 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 URADA6NGE7 173 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 IQCF5A8MTL0 148 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SOCS5O75159 536 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 ZNF30P17039 623 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 RGS1Q08116 209 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 TPRG1Q6ZUI0 275 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PTCHD4Q6ZW05 846 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 ERLEC1Q96DZ1 483 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CEP295NLQ96MC4 621 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 ZSCAN5AQ9BUG6 496 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 GSTK1Q9Y2Q3 226 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PGLSO95336 258 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SLC10A3P09131 477 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 ATP1B2P14415 290 aaPredicted RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 AQP1P29972 269 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 DGKGP49619 791 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SKP1P63208 163 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CSNK2BP67870 215 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 KANK2Q63ZY3 851 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 SLCO6A1Q86UG4 719 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PIK3C3Q8NEB9 887 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 MTERF3Q96E29 417 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PRICKLE1Q96MT3 831 aaPredicted RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 DUSP26Q9BV47 211 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 FBRSL1Q9HCM7 1045 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PALMDQ9NP74 551 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 PTBP2Q9UKA9 531 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 INSL5Q9Y5Q6 135 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 G6PDP11413 515 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 HNF4AP41235 474 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 EIF2B2P49770 351 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 HMGCS1Q01581 520 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 ZNF423Q2M1K9 1284 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 CDC73Q6P1J9 531 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 DEF8Q6ZN54 512 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 C16orf62Q7Z3J2 963 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 COLGALT2Q8IYK4 626 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 LINC01465Q8N7H1 131 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 WRAP53Q9BUR4 548 aaKnown RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 MARCH4Q9P2E8 410 aaPredicted RBP10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 IL36AQ9UHA7 158 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 RIMKLBQ9ULI2 386 aa10.56□□□□□ -0.72
LIMCH1-205ENST00000503057 A0A1W2PRU2 124 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 H0YJX3 145 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 FGBP02675 491 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 CCDC159P0C7I6 412 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 CLCN4P51793 760 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 SEMA3AQ14563 771 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 OGFRL1Q5TC84 451 aaPredicted RBP10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 TXNDC8Q6A555 127 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 ZNF534Q76KX8 674 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 EPHX4Q8IUS5 362 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 ERI1Q8IV48 349 aaKnown RBP10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 TTC29Q8NA56 475 aaPredicted RBP10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 ZNF483Q8TF39 744 aaPredicted RBP10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 RAB2BQ8WUD1 216 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 GPR62Q9BZJ7 368 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 EURLQ9NYK6 297 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 RAB23Q9ULC3 237 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 ABHD14A-ACY1A0A1B0GW23 586 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 PLK4O00444 970 aa10.55□□□□□ -0.72
LIMCH1-205ENST00000503057 NBNO60934 754 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms