RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PCDH8O95206 1070 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 MAP4P27816 1152 aaKnown RBP21.5■■□□□ 1.03
PTPN13-205ENST00000502971 SLC6A12P48065 614 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 MRPL19P49406 292 aaKnown RBP21.5■■□□□ 1.03
PTPN13-205ENST00000502971 SMAD2Q15796 467 aaKnown RBP21.5■■□□□ 1.03
PTPN13-205ENST00000502971 AGKQ53H12 422 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 PNCKQ6P2M8 343 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 NET1Q7Z628 596 aaPredicted RBP21.5■■□□□ 1.03
PTPN13-205ENST00000502971 TRIM74Q86UV6 250 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 DEFB107AQ8IZN7 70 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 HMGCLL1Q8TB92 370 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 MAGEC3Q8TD91 643 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 COX14Q96I36 57 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 ATXN10Q9UBB4 475 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 EYSQ5T1H1 3165 aa21.5■■□□□ 1.03
PTPN13-205ENST00000502971 C17orf113A0A1B0GUU1 675 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 A0A1W2PP55 124 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 IDO1P14902 403 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 GPX3P22352 226 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 CCND1P24385 295 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 HMOX2P30519 316 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 NUDT2P50583 147 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 PLOD1Q02809 727 aaPredicted RBP21.49■■□□□ 1.03
PTPN13-205ENST00000502971 C6orf163Q5TEZ5 329 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 GK5Q6ZS86 529 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 TRMT11Q7Z4G4 463 aaKnown RBP21.49■■□□□ 1.03
PTPN13-205ENST00000502971 DCBLD1Q8N8Z6 715 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 FBXL8Q96CD0 374 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 RCN3Q96D15 328 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 FOPNLQ96NB1 174 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 WDR47O94967 919 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 EGFP01133 1207 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 CATP04040 527 aaKnown RBP21.49■■□□□ 1.03
PTPN13-205ENST00000502971 DRD1P21728 446 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 PREPP48147 710 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 ABRQ12979 859 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 GRIK2Q13002 908 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 KIF19Q2TAC6 998 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 TMEM196Q5HYL7 178 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 CACUL1Q86Y37 369 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 TRAPPC5Q8IUR0 188 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 MIER2Q8N344 545 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 DNASE1L2Q92874 299 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 FAM131CQ96AQ9 280 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 SLC25A23Q9BV35 468 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 FAM8A1Q9UBU6 413 aa21.49■■□□□ 1.03
PTPN13-205ENST00000502971 PRPF19Q9UMS4 504 aaKnown RBP21.49■■□□□ 1.03
PTPN13-205ENST00000502971 COL4A2P08572 1712 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 RNASEH2AO75792 299 aaKnown RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 LMNAP02545 664 aaKnown RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 SNRPB2P08579 225 aaKnown RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 ZNF8P17098 575 aaPredicted RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 TEAD1P28347 426 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 PBLDP30039 288 aaPredicted RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 TBL3Q12788 808 aaKnown RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 ART3Q13508 389 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 PON2Q15165 354 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 KIAA1211LQ6NV74 962 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 PGM2L1Q6PCE3 622 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 IL27RAQ6UWB1 636 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 DSELQ8IZU8 1212 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 IL17RCQ8NAC3 791 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 PLA2G15Q8NCC3 412 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 ATL1Q8WXF7 558 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 CLPTM1LQ96KA5 538 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 CCDC138Q96M89 665 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 MRPL1Q9BYD6 325 aaKnown RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 SLC29A3Q9BZD2 475 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 SDR39U1Q9NRG7 319 aaPredicted RBP21.48■■□□□ 1.03
PTPN13-205ENST00000502971 CCDC167Q9P0B6 97 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 GIMAP2Q9UG22 337 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 SERGEFQ9UGK8 458 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 SLC7A8Q9UHI5 535 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 PIAS3Q9Y6X2 628 aa21.48■■□□□ 1.03
PTPN13-205ENST00000502971 ARHGEF33A8MVX0 844 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 C2CD4DB7Z1M9 353 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 H3BM21 787 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 PEX11AO75192 247 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 ERVK-8P63133 956 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 GRSF1Q12849 480 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTPN13-205ENST00000502971 KPNB1Q14974 876 aaKnown RBP21.47■■□□□ 1.03
PTPN13-205ENST00000502971 WSCD2Q2TBF2 565 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 TRMT5Q32P41 509 aaKnown RBP21.47■■□□□ 1.03
PTPN13-205ENST00000502971 ATP6AP1LQ52LC2 224 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 TCHHL1Q5QJ38 904 aaPredicted RBP21.47■■□□□ 1.03
PTPN13-205ENST00000502971 SCIMPQ6UWF3 145 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 LILRA3Q8N6C8 439 aaPredicted RBP21.47■■□□□ 1.03
PTPN13-205ENST00000502971 OR2T11Q8NH01 316 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 GULP1Q9UBP9 304 aa21.47■■□□□ 1.03
PTPN13-205ENST00000502971 LOC730098B7Z3J9 87 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 ENTPD5O75356 428 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 CLDN9O95484 217 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 DNTTP04053 509 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 PCCBP05166 539 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 MRPS21P82921 87 aaKnown RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 RPS6KA2Q15349 733 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 ZXDCQ2QGD7 858 aaPredicted RBP21.46■■□□□ 1.03
PTPN13-205ENST00000502971 PTCHD3Q3KNS1 767 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 PAOXQ6QHF9 649 aa21.46■■□□□ 1.03
PTPN13-205ENST00000502971 Q6ZSR9 355 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms