RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TRIT1Q9H3H1 467 aaKnown RBP24.43■■□□□ 1.5
LSM6-202ENST00000502781 SEMA6CQ9H3T2 930 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 RHOJQ9H4E5 214 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 TMEM9Q9P0T7 183 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 POLG2Q9UHN1 485 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 IGHV5-10-1A0A0J9YXX1 117 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 TMX2-CTNND1H3BSU7 103 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 SLU7O95391 586 aaKnown RBP24.42■■□□□ 1.5
LSM6-202ENST00000502781 TPBGLP0DKB5 382 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 THRAP10827 490 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 AMD1P17707 334 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 FDXRP22570 491 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 MAPK9P45984 424 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 TUBB4BP68371 445 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 ABRQ12979 859 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 PLCL1Q15111 1095 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 UBAP2Q5T6F2 1119 aaKnown RBP24.42■■□□□ 1.5
LSM6-202ENST00000502781 HECTD2Q5U5R9 776 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 FAM45BPQ6NSW5 357 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 UGT3A1Q6NUS8 523 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 FAM45AQ8TCE6 357 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 ATXN7L3BQ96GX2 97 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 LIN37Q96GY3 246 aaPredicted RBP24.42■■□□□ 1.5
LSM6-202ENST00000502781 VWA7Q9Y334 891 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 EIF3FO00303 357 aaPredicted RBP24.42■■□□□ 1.5
LSM6-202ENST00000502781 CBSLP0DN79 551 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 ENO3P13929 434 aaPredicted RBP24.42■■□□□ 1.5
LSM6-202ENST00000502781 TNFRSF8P28908 595 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 CBSP35520 551 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 PRKG2Q13237 762 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 NAB1Q13506 487 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 TRA2AQ13595 282 aaKnown RBP eCLIP24.42■■□□□ 1.5
LSM6-202ENST00000502781 SLMAPQ14BN4 828 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 KLHL35Q6PF15 583 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 PLXDC1Q8IUK5 500 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 RASGRP3Q8IV61 690 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 SPNS2Q8IVW8 549 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 VPS39Q96JC1 886 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 OLFM1Q99784 485 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 TMEM121BQ9BXQ6 578 aaPredicted RBP24.42■■□□□ 1.5
LSM6-202ENST00000502781 TWSG1Q9GZX9 223 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 NFS1Q9Y697 457 aa24.42■■□□□ 1.5
LSM6-202ENST00000502781 A0A1W2PNU3 283 aaPredicted RBP24.41■■□□□ 1.5
LSM6-202ENST00000502781 OR5K3A6NET4 321 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 RPN2P04844 631 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 GP5P40197 560 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 GRB7Q14451 532 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 KLHL38Q2WGJ6 581 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 CYHR1Q6ZMK1 362 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 DCUN1D3Q8IWE4 304 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 GPATCH11Q8N954 259 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 LCN9Q8WX39 176 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 GATA6Q92908 595 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 NRSN2Q9GZP1 204 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 ANKZF1Q9H8Y5 726 aa24.41■■□□□ 1.5
LSM6-202ENST00000502781 TRMT6Q9UJA5 497 aaKnown RBP24.41■■□□□ 1.5
LSM6-202ENST00000502781 MPC1LP0DKB6 136 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 PHBP35232 272 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 ARHGAP22Q7Z5H3 698 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 OR4E2Q8NGC2 313 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 CFAP61Q8NHU2 1237 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 CCDC74BQ96LY2 380 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 NRTNQ99748 197 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 MENTQ9BUN1 341 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 TXLNGYQ9BZA5 131 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 ACSS3Q9H6R3 686 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 ICKQ9UPZ9 632 aa24.4■■□□□ 1.5
LSM6-202ENST00000502781 RUVBL2Q9Y230 463 aaKnown RBP24.4■■□□□ 1.5
LSM6-202ENST00000502781 FAM95CA0A1B0GW59 222 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 HGSO14964 777 aaPredicted RBP24.39■■□□□ 1.49
LSM6-202ENST00000502781 CAPN5O15484 640 aaPredicted RBP24.39■■□□□ 1.49
LSM6-202ENST00000502781 PSIP1O75475 530 aaKnown RBP24.39■■□□□ 1.49
LSM6-202ENST00000502781 C1orf105O95561 183 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 FAM153BP0C7A2 387 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 MYBL2P10244 700 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 GFERP55789 205 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 RTP5Q14D33 572 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 FAM153CQ494X1 144 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 PAQR3Q6TCH7 311 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 CTAGE3PQ8IX95 158 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 CPNE9Q8IYJ1 553 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 PPM1NQ8N819 430 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 SKA2Q8WVK7 121 aaPredicted RBP24.39■■□□□ 1.49
LSM6-202ENST00000502781 RBBP8Q99708 897 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 STRADBQ9C0K7 418 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 SRMSQ9H3Y6 488 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 HRASLS2Q9NWW9 162 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 SEMA5BQ9P283 1151 aa24.39■■□□□ 1.49
LSM6-202ENST00000502781 CCDC187A0A096LP49 1063 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 OR6C74A6NCV1 312 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 TOX3O15405 576 aaPredicted RBP24.38■■□□□ 1.49
LSM6-202ENST00000502781 TSPAN12O95859 305 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 ANKRD34CP0C6C1 535 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 MCM3P25205 808 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 MPSTP25325 297 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 EIF3IQ13347 325 aaKnown RBP24.38■■□□□ 1.49
LSM6-202ENST00000502781 C16orf72Q14CZ0 275 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 EFTUD2Q15029 972 aaKnown RBP eCLIP24.38■■□□□ 1.49
LSM6-202ENST00000502781 PHF19Q5T6S3 580 aa24.38■■□□□ 1.49
LSM6-202ENST00000502781 LRRC8EQ6NSJ5 796 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms