RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 SGSM3Q96HU1 749 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 IP6K3Q96PC2 410 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 SLC29A3Q9BZD2 475 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 C10orf88Q9H8K7 445 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 PCMTD2Q9NV79 361 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 CUEDC1Q9NWM3 386 aaPredicted RBP11.67□□□□□ -0.54
CNOT4-211ENST00000498534 ZDHHC3Q9NYG2 299 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 GPR83Q9NYM4 423 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 EFR3BQ9Y2G0 817 aa11.67□□□□□ -0.54
CNOT4-211ENST00000498534 BTN3A3O00478 584 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 BTN3A1O00481 513 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 ZNF749O43361 778 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 SORBS2O94875 1100 aaKnown RBP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 IGHEP01854 428 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 GSTM1P09488 218 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 RBP3P10745 1247 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PSMB4P28070 264 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 MC4RP32245 332 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 MARCKSL1P49006 195 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 OTUD4Q01804 1114 aaKnown RBP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 GSTM4Q03013 218 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PRKG2Q13237 762 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 NCF4Q15080 339 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 SKOR2Q2VWA4 1001 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PTCHD3Q3KNS1 767 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 ZRANB3Q5FWF4 1079 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 C11orf63Q6NUN7 778 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 LURAP1LQ8IV03 231 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 ZBTB2Q8N680 514 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 OR52E1Q8NGJ3 308 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PNPLA2Q96AD5 504 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 CALR3Q96L12 384 aaKnown RBP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 TRAPPC9Q96Q05 1148 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 ALS2CR12Q96Q35 445 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 TBL1YQ9BQ87 522 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 DHRS4Q9BTZ2 278 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PITPNM3Q9BZ71 974 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 OR52A5Q9H2C5 316 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 COG4Q9H9E3 785 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 ARNT2Q9HBZ2 717 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 C5AR2Q9P296 337 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 GPN3Q9UHW5 284 aaPredicted RBP11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PCDHA3Q9Y5H8 950 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 AP1M2Q9Y6Q5 423 aa11.66□□□□□ -0.54
CNOT4-211ENST00000498534 PEX12O00623 359 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 TJP3O95049 919 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 DDAH2O95865 285 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 ALPPP05187 535 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 CAPN1P07384 714 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 PDHA2P29803 388 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 OTX2P32243 289 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 LMAN1P49257 510 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 ZNF140P52738 457 aaPredicted RBP11.65□□□□□ -0.54
CNOT4-211ENST00000498534 OLIG2Q13516 323 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 SSPNQ14714 243 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 KYNUQ16719 465 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 EIF2S3LQ2VIR3 472 aaKnown RBP11.65□□□□□ -0.54
CNOT4-211ENST00000498534 ZNF789Q5FWF6 425 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 FAM69BQ5VUD6 431 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 MLIPQ5VWP3 458 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 SERPINA9Q86WD7 417 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 TMTC1Q8IUR5 882 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 CCDC110Q8TBZ0 833 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 KRT35Q92764 455 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 TCTN2Q96GX1 697 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 FER1L6-AS2Q96M78 137 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 SPATA13Q96N96 652 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.54
CNOT4-211ENST00000498534 GORASP1Q9BQQ3 440 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 NUDT9Q9BW91 350 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 OSBPL8Q9BZF1 889 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 KLHL25Q9H0H3 589 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 CASS4Q9NQ75 786 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 ACTR10Q9NZ32 417 aa11.65□□□□□ -0.54
CNOT4-211ENST00000498534 CENPEQ02224 2701 aa11.65□□□□□ -0.55
CNOT4-211ENST00000498534 SPENQ96T58 3664 aaKnown RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 IGLV3-16A0A075B6K0 115 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 TCP11X1B4DZS4 312 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 CCL22O00626 93 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 LDB2O43679 373 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 SEMA7AO75326 666 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 OR2B3O76000 313 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 AP2A2O94973 939 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 PVRP15151 417 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 ACRV1P26436 265 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 SHMT2P34897 504 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 NAP1L1P55209 391 aaKnown RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 MSLNQ13421 630 aaPredicted RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 ATP1A4Q13733 1029 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 BOP1Q14137 746 aaKnown RBP11.64□□□□□ -0.55
CNOT4-211ENST00000498534 SPARCL1Q14515 664 aa11.64□□□□□ -0.55
CNOT4-211ENST00000498534 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms