RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ASB8Q9H765 288 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 FAM60AQ9NP50 221 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 TXLNGQ9NUQ3 528 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 ACTR10Q9NZ32 417 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 COPG2Q9UBF2 871 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 DHCR7Q9UBM7 475 aaKnown RBP13.47□□□□□ -0.25
CCDC58-207ENST00000498466 PIKFYVEQ9Y2I7 2098 aa13.47□□□□□ -0.25
CCDC58-207ENST00000498466 A0A1B0GUH1 482 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 SMTNL1A8MU46 457 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 ZSCAN9O15535 394 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 SGTAO43765 313 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 SRP72O76094 671 aaKnown RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 SERPINC1P01008 464 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 UMODP07911 640 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 H2AFZP0C0S5 128 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 RALBP11234 206 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 TSFMP43897 325 aaKnown RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 PRKG2Q13237 762 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 ZNF169Q14929 603 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 ZXDCQ2QGD7 858 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 AGAP7PQ5VUJ5 663 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 IRAK1BP1Q5VVH5 260 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 MRPL14Q6P1L8 145 aaKnown RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 SPESP1Q6UW49 350 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 H2AFVQ71UI9 128 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 ZC3H18Q86VM9 953 aaKnown RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 ZNF655Q8N720 491 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 PHC3Q8NDX5 983 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 COG1Q8WTW3 980 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 CPLX3Q8WVH0 158 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 AGAP4Q96P64 663 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 HGH1Q9BTY7 390 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 KLHL8Q9P2G9 620 aaPredicted RBP13.46□□□□□ -0.25
CCDC58-207ENST00000498466 FBXL4Q9UKA2 621 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 ARL5AQ9Y689 179 aa13.46□□□□□ -0.25
CCDC58-207ENST00000498466 SPTBP11277 2137 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 H3BMH7 237 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 HCRTR1O43613 425 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 ALOX12BO75342 701 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 KRT1P04264 644 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 STSP08842 583 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 PRLHRP49683 370 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 WASHC5Q12768 1159 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 NR1I3Q14994 352 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 PRKD1Q15139 912 aaPredicted RBP13.45□□□□□ -0.26
CCDC58-207ENST00000498466 NKAIN1Q4KMZ8 207 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 PRAMEF13Q5VWM6 474 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 FAM180AQ6UWF9 173 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 BZW1Q7L1Q6 419 aaKnown RBP13.45□□□□□ -0.26
CCDC58-207ENST00000498466 TRIM73Q86UV7 250 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 TMEM151BQ8IW70 566 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 ADGRF3Q8IZF5 1079 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 OR4K2Q8NGD2 314 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
CCDC58-207ENST00000498466 OXNAD1Q96HP4 312 aaPredicted RBP13.45□□□□□ -0.26
CCDC58-207ENST00000498466 FSD1LQ9BXM9 530 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 EPS8L2Q9H6S3 715 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 MVB12BQ9H7P6 319 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 COG4Q9H9E3 785 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 SLC6A20Q9NP91 592 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 SAE1Q9UBE0 346 aaPredicted RBP13.45□□□□□ -0.26
CCDC58-207ENST00000498466 FKBPLQ9UIM3 349 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 CRLS1Q9UJA2 301 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 CDC23Q9UJX2 597 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 PDZD2O15018 2839 aa13.45□□□□□ -0.26
CCDC58-207ENST00000498466 C17orf113A0A1B0GUU1 675 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 C2orf81A6NN90 581 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 CFAP99D6REC4 459 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 CTSBP07858 339 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 ATP1B2P14415 290 aaPredicted RBP13.44□□□□□ -0.26
CCDC58-207ENST00000498466 ZBED6P86452 979 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 MPP3Q13368 585 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 TLR1Q15399 786 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 ZIC1Q15915 447 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 B3GNTL1Q67FW5 361 aaPredicted RBP13.44□□□□□ -0.26
CCDC58-207ENST00000498466 ZNF449Q6P9G9 518 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 IGFL2Q6UWQ7 119 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 FCRL5Q96RD9 977 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 BPIFA3Q9BQP9 254 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 NDC1Q9BTX1 674 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 PACSIN1Q9BY11 444 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 OR52A5Q9H2C5 316 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 OLAHQ9NV23 265 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 POLEQ07864 2286 aa13.44□□□□□ -0.26
CCDC58-207ENST00000498466 JRKO75564 520 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 UGT2B7P16662 529 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 ALAS2P22557 587 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 MMP11P24347 488 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 PDHA2P29803 388 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 GABRA4P48169 554 aa13.43□□□□□ -0.26
CCDC58-207ENST00000498466 CD151P48509 253 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms