RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR5K4A6NMS3 321 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ARHGEF33A8MVX0 844 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CDC7O00311 574 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 SIGLEC6O43699 453 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ZBTB14O43829 449 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 SYF2O95926 243 aaKnown RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 VIPP01282 170 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 RPN2P04844 631 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 MYF5P13349 255 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CD1DP15813 335 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 KRT4P19013 534 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 TFEBP19484 476 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CYP2A7P20853 494 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 TGM1P22735 817 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ACADLP28330 430 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CCNFP41002 786 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 MAPK9P45984 424 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 PPM1FP49593 454 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CSRP3P50461 194 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 KPNA2P52292 529 aaKnown RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ATP6V0D1P61421 351 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 DAB2P98082 770 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 DLG1Q12959 904 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 PLCL1Q15111 1095 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 NR0B2Q15466 257 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 TSNQ15631 228 aaKnown RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 FAM83EQ2M2I3 478 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 TSNAXIP1Q2TAA8 658 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 IYDQ6PHW0 289 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ZNF761Q86XN6 746 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 NAXDQ8IW45 347 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 DCUN1D3Q8IWE4 304 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 PHC3Q8NDX5 983 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ACMSDQ8TDX5 336 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 PGM2Q96G03 612 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 FERD3LQ96RJ6 166 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 DERL2Q9GZP9 239 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ZMYND15Q9H091 742 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 IQCGQ9H095 443 aaKnown RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ALG9Q9H6U8 611 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 IGSF5Q9NSI5 407 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ZNF624Q9P2J8 865 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CPNE7Q9UBL6 633 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 FTSJ1Q9UET6 329 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 CIDEBQ9UHD4 219 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 ADAMTS6Q9UKP5 1117 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 IKZF3Q9UKT9 509 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 PLAGL1Q9UM63 463 aa13.23□□□□□ -0.29
CPNE1-227ENST00000498056 TDRKHQ9Y2W6 561 aaKnown RBP13.23□□□□□ -0.29
CPNE1-227ENST00000498056 RIF1Q5UIP0 2472 aaKnown RBP13.22□□□□□ -0.29
CPNE1-227ENST00000498056 PRAMEF33A0A0G2JMD5 474 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 AGPSO00116 658 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 COPEO14579 308 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 MAP2K7O14733 419 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 GLRA3O75311 464 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 KLHL2O95198 593 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 C8GP07360 202 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 SLC19A1P41440 591 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 RPIAP49247 311 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 UBE2IP63279 158 aaKnown RBP13.22□□□□□ -0.29
CPNE1-227ENST00000498056 PRKG2Q13237 762 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.22□□□□□ -0.29
CPNE1-227ENST00000498056 STPG1Q5TH74 334 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 TTC23LQ6PF05 361 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 KIAA2013Q8IYS2 634 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
CPNE1-227ENST00000498056 AVL9Q8NBF6 648 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 OR5K2Q8NHB8 316 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 JPH3Q8WXH2 748 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-227ENST00000498056 PTERQ96BW5 349 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 APOPT1Q96IL0 206 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 UBXN10Q96LJ8 280 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 APOLD1Q96LR9 279 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 NMRAL1Q9HBL8 299 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 UTP6Q9NYH9 597 aaKnown RBP13.22□□□□□ -0.29
CPNE1-227ENST00000498056 RNF112Q9ULX5 631 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 UNC13CQ8NB66 2214 aa13.22□□□□□ -0.29
CPNE1-227ENST00000498056 HEATR5BQ9P2D3 2071 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SUPT3HB4E1H0 165 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 OPA1O60313 960 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SPAG7O75391 227 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 PSIP1O75475 530 aaKnown RBP13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SUPT3HO75486 399 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 MATN4O95460 622 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-227ENST00000498056 CD59P13987 128 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 NDUFS1P28331 727 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SLC26A3P40879 764 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 SLC14A1Q13336 389 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 GPR18Q14330 331 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 OR4D1Q15615 310 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 CCSMST1Q4G0I0 132 aa13.21□□□□□ -0.29
CPNE1-227ENST00000498056 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms