RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 FBXL12Q9NXK8 326 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 ATXN10Q9UBB4 475 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 POLG2Q9UHN1 485 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 PTBP2Q9UKA9 531 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 CNOT6Q9ULM6 557 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 SCML1Q9UN30 329 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 DNAJC15Q9Y5T4 150 aa7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 COPG1Q9Y678 874 aaKnown RBP7.9□□□□□ -1.14
PDZRN3-212ENST00000498048 THADAQ6YHU6 1953 aa7.9□□□□□ -1.15
PDZRN3-212ENST00000498048 A0A1B0GTL3 188 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ATP6AP2A0A1C7CYW4 349 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC5A10A0PJK1 596 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 A8MUI8 341 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ARHGEF33A8MVX0 844 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 B2RBV5 119 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 H3BM21 787 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 OR7A17O14581 309 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 UBDO15205 165 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 TAPBPO15533 448 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 NARSO43776 548 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 RNGTTO60942 597 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 LILRB5O75023 590 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 VPS4BO75351 444 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 KATNA1O75449 491 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 PSIP1O75475 530 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 STK16O75716 305 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ATP6AP2O75787 350 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 SLCO2B1O94956 709 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CAPN1P07384 714 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 FGF4P08620 206 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 EPB42P16452 691 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ZNF8P17098 575 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 TEAD1P28347 426 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ADSLP30566 484 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 IGFALSP35858 605 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 HNMTP50135 292 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 HTR6P50406 440 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 NUDT2P50583 147 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ATP4BP51164 291 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CCR3P51677 355 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 MNAT1P51948 309 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 RPS21P63220 83 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ELF3P78545 371 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 FASTKQ14296 549 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 AGERQ15109 404 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CCDC85BQ15834 202 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 XKR7Q5GH72 579 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 EOGTQ5NDL2 527 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 TCHHL1Q5QJ38 904 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 PNCKQ6P2M8 343 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CYHR1Q6ZMK1 362 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 GK5Q6ZS86 529 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 KBTBD6Q86V97 674 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 LRRTM4Q86VH4 590 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 NLRP8Q86W28 1048 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 LONP2Q86WA8 852 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CPSF7Q8N684 471 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 LILRA3Q8N6C8 439 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 RBM15BQ8NDT2 890 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 OR4F6Q8NGB9 312 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 OR14C36Q8NHC7 312 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CFAP61Q8NHU2 1237 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 MCOLN3Q8TDD5 553 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 UTP4Q969X6 686 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 FBXL8Q96CD0 374 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 TUBGCP3Q96CW5 907 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 COX14Q96I36 57 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 LENG8Q96PV6 779 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 CDK15Q96Q40 435 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 PHF7Q9BWX1 381 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 SLC12A9Q9BXP2 914 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 MKRN2Q9H000 416 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 IPPKQ9H8X2 491 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 PREBQ9HCU5 417 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 PHPT1Q9NRX4 125 aaPredicted RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 LIMD1Q9UGP4 676 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 TRPS1Q9UHF7 1281 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 FZD4Q9ULV1 537 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 ZFR2Q9UPR6 939 aaKnown RBP7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 TIMM22Q9Y584 194 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 SZT2Q5T011 3432 aa7.89□□□□□ -1.15
PDZRN3-212ENST00000498048 SPAG17Q6Q759 2223 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 CCDC88CQ9P219 2028 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 A0A1W2PQF6 199 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 A0A1W2PQU0 124 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 TCRBV21S2A2A0A5A6 115 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 KRT87PA6NCN2 255 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 GFYI3L273 518 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SOX1O00570 391 aaPredicted RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 CIB2O75838 187 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 RASSF9O75901 435 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 MATN4O95460 622 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ALDOCP09972 364 aaKnown RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 LINC00032P0C843 101 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 ACADMP11310 421 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 SRFP11831 508 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 MYCLP1P12525 358 aaPredicted RBP7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 HGFP14210 728 aa7.88□□□□□ -1.15
PDZRN3-212ENST00000498048 LBPP18428 481 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms